Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3538 ATGACAAGAAAATTTCTTGTTTGTTCCATGCTTCTTGAAGTTGTAATTTGTTTCATTGTTATTGGTGTTTATGGTGAGAAGGATTTATCTATGAGGAAATTTTCTGATGGAAACTATCATGAAAGAATACGAAAATTGCAATCTTTTAAAGCTTCTTTAACAAGACATGATTCCATTGCTTCAACACCATCATCTTCTTTTTCACCTTCACCTTCTCCTCAGCCAGCTGAGGGTTTGAACAATCCAAGAGTATACCATGTGACATCATATGGTGCAGACCCAACAGGAAATTCAGATAGTACTGAAGCATTACTTGCAGCCATAGCAGATGCAGCCAATGGTCCAAGTGAAGATTATTTGATGGAAGGCATAAGTAACCTTGGAGGTGCACAAGTTAATCTTGAAGGTGGAAATTACATGATCCGAAAGTCACTCAAGTTTCCGGTATCCGGCGTTGGGAACCTCATGATACATGGAGGAACCATAAAAGCCTCAGATGATTTTCCTAATGATGGCTACATCATTGATTTATCAACCTCTTCAAATGAAAATGATGGAAAAAATTCACCTTCATCATCTTACAATTTTGAGTACATAACTCTCAAGGACCTCTTATTGGATTCAAACTTTAGAGGAGGGGGCATTTCAGTCATAAATTCACTCAGAACAAACATTGACAACTGTTACATTACACATTTCACAACAAATGGAATTTTAGTCCAAAGTGGCCATGAAACATACATAAGAAATTCTTTCCTTGGCCAACACATAACCGCCGGAGGCGATAAAAACGAAAGGAATTTCTCAGGTACAGCAATAAACCTCCAAGGTAACGATAACGCTGTCACCGATGTTGTAATTTTCTCTGCTGCTATAGGAATCATGGTAACTGGTCAAGCAAACACATTTTCTGGTGTACATTGTTACAATAAGGCCACTGGATTCGGTGGTACCGGAATTTATTTGAAACTACCTGGTTTAACACAAACAAGGATTGTGAATTCATACATGGATTTTACAAGTATTGTTGCTGAAGATCCTGTTCAACTTCATATTTCTAGCAGCTTCTTCCTTGGTGATGCCAATATTGTGTTGAAATCTATGAAAGGTGTTTTAAGTGGTGTTACTATTGTTGATAACATGTTCTCAGGATCAGATCAAGGTGTTGAAATTGTTCATTTGGATAAATCAAATAGTCCTTTTCAACAAATTGATCAAGTTATTGTTGATAGGAACATTGTGAGAGGGATGAATTTGAAGGCTACTGTTGCGAAAAAATCGTTGCAAGGGAATGGAACTTCATGGAATGTTGATTTTAACAACATTCTTCTTTTTCCTAACCTTATTAAAAATGTTCAGTACTCATTAAGTTCAACAGGTAGTAGTTTTCCTAATCATGCTTTGAGGAATGTGTCGGATAATCGCGTTGTGATCGAAACAAGTGAAGCGGTTGCTGCGAACGTTTTTGTCGCGGTGGATCAAAGCATGTCAAATTGA 1497 0.3721 MTRKFLVCSMLLEVVICFIVIGVYGEKDLSMRKFSDGNYHERIRKLQSFKASLTRHDSIASTPSSSFSPSPSPQPAEGLNNPRVYHVTSYGADPTGNSDSTEALLAAIADAANGPSEDYLMEGISNLGGAQVNLEGGNYMIRKSLKFPVSGVGNLMIHGGTIKASDDFPNDGYIIDLSTSSNENDGKNSPSSSYNFEYITLKDLLLDSNFRGGGISVINSLRTNIDNCYITHFTTNGILVQSGHETYIRNSFLGQHITAGGDKNERNFSGTAINLQGNDNAVTDVVIFSAAIGIMVTGQANTFSGVHCYNKATGFGGTGIYLKLPGLTQTRIVNSYMDFTSIVAEDPVQLHISSSFFLGDANIVLKSMKGVLSGVTIVDNMFSGSDQGVEIVHLDKSNSPFQQIDQVIVDRNIVRGMNLKATVAKKSLQGNGTSWNVDFNNILLFPNLIKNVQYSLSSTGSSFPNHALRNVSDNRVVIETSEAVAANVFVAVDQSMSN* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3538 498 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 10 496 - -
Mal4g3538 498 MobiDBLite consensus disorder prediction 60 92 - -
Mal4g3538 498 SMART pbh1 277 298 IPR006626 -
Mal4g3538 498 SMART pbh1 372 393 IPR006626 -
Mal4g3538 498 SMART pbh1 220 242 IPR006626 -
Mal4g3538 498 SMART pbh1 152 177 IPR006626 -
Mal4g3538 498 PANTHER POLYGALACTURONASE QRT3 10 496 IPR039279 GO:0004650
Mal4g3538 498 Gene3D - 84 497 IPR012334 -
Mal4g3538 498 SUPERFAMILY Pectin lyase-like 83 471 IPR011050 -
Mal4g3538 498 Pfam Pectate lyase superfamily protein 87 314 IPR024535 -
Mal4g3538 498 MobiDBLite consensus disorder prediction 60 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3538 Mal-Chr4 104555063 104557175 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3538 - - gmx:100804107 777.704