Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3531 ATGAATGAACAAGATGAGTCTGAAGTTGGCAAAAATGAAAAACCTGTTCGTGTTTATGCCGATGGAATCTATGATCTCTTTCACTTCGGCCATGCCCGTTCTCTTGAACAAGCCAAGAAATCGTTTCCAAATACATATCTCCTTGTTGGATGCTGCAGTGATGAGATCACACACAAGTACAAGGGTAAAACTGTTATGAATGAGCAAGAACGATATGAGTCTCTTCGTCACTGCAAGTGGGTTGATGAAGTTATTCCAGATGTGCCGTGGGTAATCAATCAGGAGTTCATTGACAAGCATAAAATTGACTATGTGGCACATGATGCTCTTCCTTATGCTGATAATAGTGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGGCTATTGGAAAATTTAAGGAAACAAAGCGGACTGAAGGAATTTCTACCTCTGATATCATAATGAGAATCATCAAAGATTATAACCAGTATGTAGTGCGTAATTTGGATCGTGGTTATTCAAGAAAGGAGCTAGGTGTGAGCTATGTCAAGGAGAAAAGATTGAGAATGAACATGGGACTTAAAAAGTTGCAGGAGAGTGTCAAGAAACAACAAGAGACAGTGGGAAAGAAGATAGGAACAGTGAGAAAAATTGCTGGGATGAATCGTACTGAATGGGTCGAAAATGCAGATCGATTAGTTGCTGGATTTCTCGAGATGTTTGAAGAAGGATGCCACAAAATGGGTACAGCAATCAGAGACAGAATTCAAGAACAACTGAAGGCACAACAGCTAAGATCTCTTCTTTACGATGAGTGGGATGATGATGTTGATGACGAATTCTATGAAGATGAATCTGTAGAATACTACAGCGACTGA 858 0.3963 MNEQDESEVGKNEKPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCSDEITHKYKGKTVMNEQERYESLRHCKWVDEVIPDVPWVINQEFIDKHKIDYVAHDALPYADNSGAGKDVYEFVKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVVRNLDRGYSRKELGVSYVKEKRLRMNMGLKKLQESVKKQQETVGKKIGTVRKIAGMNRTEWVENADRLVAGFLEMFEEGCHKMGTAIRDRIQEQLKAQQLRSLLYDEWDDDVDDEFYEDESVEYYSD* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3531 285 CDD CCT 14 165 IPR041723 -
Mal4g3531 285 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 17 84 IPR004821 GO:0003824|GO:0009058
Mal4g3531 285 Pfam Cytidylyltransferase-like 19 148 IPR004821 GO:0003824|GO:0009058
Mal4g3531 285 Gene3D HUPs 1 236 IPR014729 -
Mal4g3531 285 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 3 283 - -
Mal4g3531 285 PANTHER CYTIDYLYLTRANSFERASE 3 283 IPR045049 GO:0004105|GO:0006657
Mal4g3531 285 SUPERFAMILY Nucleotidylyl transferase 17 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3531 Mal-Chr4 104401387 104406491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3531 42 277 Acyl Lipid Metabolism Gene Families AT2G32260 76.793 1.74e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3531 K00968 - gmx:100786249 468.388