Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3473 ATGTTTCAATCATCAATGGAAGGTACACTCTTCCCTAATAGACCAGTTCTTCCACTCCCCACAAAAAATCCAACTCAACAACCATTGAATTTCAAACCAACATTCTCACACTCTCCACCACCACCACCACCACAATCACCATTACCACAAACACCACTTTCATATCATTTAGATTCTCTTCTTCACCACCTCAAACACCTTTCTTCAACACCTATAACCACTCACACACAAACACTTGTCCCTATAAACCAACACCACAGCAAGAACAGCGACACCCATTTCACTTCTCTCCAAATTTCCATTGATGAAAATGAGGAGAATATTCAAAATGGTCATACAAAACGACCCATTTCATCTTCTGTTTATTATAACCATTTTGATGATGTAAAGTTTGGATTTTTATCTGATAAAGGTAAGTTTATGTTGAATTCAATTGTTGGGTCGTCTTTAAATGACTTGATTGAGTTTTTCAACTCTGTGAAAGGTGAATTACTTGAGTCTGATATTTGGAGTTTGTTGAAGGCTTTGGATCTTTCTGGGAATTGGGAGAGAGCTTTTTTGTTGTTTGAATGGGTTTGGTTGAATTTTGGGTCTGAAAATATGAGGGTAGATAATCAATCTGTTGAACTTATGGTTAAGATGTTAGGTAGAGAATCACAGTATTCAATTGCTTCTAAGTTGTTTGATATAATTCCTGTTGAGGAATATTCACTTGATGTTAAGGCTTGTACTACTGTTCTTCATGCTTATGCGCGAACCGGTAAGTATAAACGAGCGATTGATATCTTTGAGAAGATGAAGGAGACCGGTCTTGATCCAACTTTGGTTACTTACAATGTTATGCTTGATGTTTATGGGAAGATGGGTCGGTCTTGGAGTATGATTTTGGAGTTGTTGGATGAGATGAGGAGTAAAGGGCTTGAGTTTGATGAGTTTACTTGTAGCACTGTGATATCTGCTTGTGGGAGAGAGGGTATGCTTAATGAAGCAAGGAGGTTTTTTGATGATTTGAAATTGAATGGATATAAACCTGGAACCGTTACGTATAACTCTATGCTGCAGGTTTTTGGGAAGGCGGGAGTTTACGTAGAGGCCTTGAACATCTTAAAGGAAATGGAGGATAATCATTGTGTGCCGGATGGTGTTACTTACAATGAGCTTGTGGCAGCGTATGTAAGAGCCGGGTTTCTTGATGAAGGTGCTGCTGTGATTGATACAATGGCAAGCAAAGGAGTTATGCCGAATGCTATTACATATACTACTGTGATAAACGCCTATGGTAAGGTGGGGGATGAGGACAAGGCTTTAAAGGTGTATGGTCAAATGAAGGAGTTGGGTTGTGTTCCTAATGTATGCACATACAACTCTGTTCTTGCAATCTTAGGCAAGAGGTCGAGATCAGAAGACATGATTCAGATTCTATGCGACATGAAGTTGAATGGATGTCCTCCGAATCGTATAACATGGAACACGATGCTTGCTGTATGTGGTGAGAAGGGTAAGCAAAAATATGTCAGTCAGGTTCTAAGGGAAATGAAAAACTGTGGATTCGAGCCTGATAAAGACACGTTCAATACGTTAATTAGTGCCTATGGTCGGTGTGGATCTGAAGTTGATGTTGCAAAAATGTACGGGGAAATGGTTACAGCAGGCTTTTCTCCATGTATAACGACTTACAATGCTCTTCTAAATGCTCTTGCTAGGCGGGGCGATTGGAAAGCGGCAGAATCTATCATTCTTGACATGCGGAGTAAGGGCTTTAAGCCGAACGAAACTTCATATTCGCTTTTGCTTCATTGTTATTCTAAGGCTTGGAATGTCACGGGGTTAGAGAAGGTTGAGAAGGAAATTTACGACGGTCTCGTCTTTCCTAGTTGGACGCTTTTGAGGACCCTTGTCCTTACAAATTACAAGTGCAGACAGCTTCAGGGAATGGAAAGGGCATTTCATCAGTTGCAAAAGAATGGATATAAACTTGATATGGTTGTAATTAACTCTATGCTTTCAATGTTTGTCCGTAACCATAAGCTCGAGAAGGCTCATGAAATCCTAGATCTTATTTACAAAAGTGGGTTGCAGCCGAATCTTGTGACATATAACAGCTTGATAGACTTGTATGCTCGAGTCGGTGATTGTTGGAAAGCAGAAGAAATGCTCAAGGAAATTCAAAACTCCGGTATAAATCCAGATGTTGTGTCGTACAATACCATCATCAAGGGATTTTGTAAAAAAGGGCTCGTGCAGGATGCTATCAGAATTCTTTCTGAAATGACCGCTAGTGGAATTCAACCATGTCCAATTACATTCAATACATTCTTGTCATGCTATGCAGGAAAGGGTCTGTTTGATGAAGCAAATGAAGTCATTAGATATATGATTGAACATGGTTGCATGCCTAATGAACTAACTTACAAGATTGTAATTGATGGTTATTGTAAAGCAAAAAAGCATAAAGAAGCAATGGACTTTGTGTCTAAGATTAAGGAGGTTGATATCTCTTTTGATGATCAATCTATGAAAAAGCTAGCTTCTTGTATTAGGGAGAGTTTGGGGTCTTGA 2559 0.3935 MFQSSMEGTLFPNRPVLPLPTKNPTQQPLNFKPTFSHSPPPPPPQSPLPQTPLSYHLDSLLHHLKHLSSTPITTHTQTLVPINQHHSKNSDTHFTSLQISIDENEENIQNGHTKRPISSSVYYNHFDDVKFGFLSDKGKFMLNSIVGSSLNDLIEFFNSVKGELLESDIWSLLKALDLSGNWERAFLLFEWVWLNFGSENMRVDNQSVELMVKMLGRESQYSIASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIDIFEKMKETGLDPTLVTYNVMLDVYGKMGRSWSMILELLDEMRSKGLEFDEFTCSTVISACGREGMLNEARRFFDDLKLNGYKPGTVTYNSMLQVFGKAGVYVEALNILKEMEDNHCVPDGVTYNELVAAYVRAGFLDEGAAVIDTMASKGVMPNAITYTTVINAYGKVGDEDKALKVYGQMKELGCVPNVCTYNSVLAILGKRSRSEDMIQILCDMKLNGCPPNRITWNTMLAVCGEKGKQKYVSQVLREMKNCGFEPDKDTFNTLISAYGRCGSEVDVAKMYGEMVTAGFSPCITTYNALLNALARRGDWKAAESIILDMRSKGFKPNETSYSLLLHCYSKAWNVTGLEKVEKEIYDGLVFPSWTLLRTLVLTNYKCRQLQGMERAFHQLQKNGYKLDMVVINSMLSMFVRNHKLEKAHEILDLIYKSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKEIQNSGINPDVVSYNTIIKGFCKKGLVQDAIRILSEMTASGIQPCPITFNTFLSCYAGKGLFDEANEVIRYMIEHGCMPNELTYKIVIDGYCKAKKHKEAMDFVSKIKEVDISFDDQSMKKLASCIRESLGS* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 345 379 IPR002885 -
Mal4g3473 852 PANTHER - 6 848 - -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 380 414 IPR002885 -
Mal4g3473 852 Gene3D Tetratricopeptide repeat domain 505 629 IPR011990 GO:0005515
Mal4g3473 852 Pfam PPR repeat family 554 602 IPR002885 -
Mal4g3473 852 Pfam PPR repeat family 765 813 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 310 344 IPR002885 -
Mal4g3473 852 Pfam Pentatricopeptide repeat domain 298 358 IPR002885 -
Mal4g3473 852 Pfam Pentatricopeptide repeat domain 473 532 IPR002885 -
Mal4g3473 852 Pfam Pentatricopeptide repeat domain 403 464 IPR002885 -
Mal4g3473 852 Pfam Pentatricopeptide repeat domain 649 706 IPR002885 -
Mal4g3473 852 Pfam Pentatricopeptide repeat domain 363 392 IPR002885 -
Mal4g3473 852 Pfam Pentatricopeptide repeat domain 238 288 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 765 799 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 274 309 IPR002885 -
Mal4g3473 852 PANTHER OS03G0856100 PROTEIN 6 848 - -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 450 484 IPR002885 -
Mal4g3473 852 Gene3D Tetratricopeptide repeat domain 747 849 IPR011990 GO:0005515
Mal4g3473 852 Gene3D Tetratricopeptide repeat domain 630 746 IPR011990 GO:0005515
Mal4g3473 852 Gene3D Tetratricopeptide repeat domain 143 290 IPR011990 GO:0005515
Mal4g3473 852 Gene3D Tetratricopeptide repeat domain 393 504 IPR011990 GO:0005515
Mal4g3473 852 Gene3D Tetratricopeptide repeat domain 291 392 IPR011990 GO:0005515
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 523 554 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 487 520 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 382 416 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 662 695 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 452 485 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 697 731 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 558 591 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 417 451 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 242 274 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 347 380 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 767 801 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 732 764 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 803 835 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 276 310 IPR002885 -
Mal4g3473 852 TIGRFAM PPR: pentatricopeptide repeat domain 312 345 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 485 519 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 800 834 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 520 554 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 415 449 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 730 764 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 695 729 IPR002885 -
Mal4g3473 852 MobiDBLite consensus disorder prediction 34 50 - -
Mal4g3473 852 MobiDBLite consensus disorder prediction 1 53 - -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 555 589 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 660 694 IPR002885 -
Mal4g3473 852 Pfam PPR repeat 726 758 IPR002885 -
Mal4g3473 852 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 239 273 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3473 Mal-Chr4 102384853 102387411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3473 325 837 Glycosyltransferase AT1G05670 23.541 7.48e-48 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3473 K17710 - gmx:100803889 1252.65