Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3425 ATGTTGTTCCCTTCAACAAAACCCTTCACATTCTCACTACAATCTTCCCTCAAACGTGGAATCACTCCCACTCCAAATTCAATCACCACCTTCTTCAATTTCCTCTTCAATCTCCGCAAATTCAACCTAATCATCAACCTCTTCCATCAATTCACCACCAACAAAATCCAAATCCCTCACAAAACCCACAAAATCCTCACATGGGCACTCCTCAACTCACACCATTTCAACCAAGCAGAAAAATTCATGAAGCAAAATCCTCACACCCCATTTGGCGCGTGGGACAAGCTCATTCATGGTTTATGCTCCACGCGCCAAAACCCAGAAAGGATTTTATCCGTTCTGCAACATTGTTTGGTAAACCGTGGTGTTTTTATATCAAAATCTGTTTTTTGTTGTGTGATTGAGAGATTTTGCGTTTTGGGTCATGTGGGTAAGGCTATTGAGGTTGTTGAATTGATGAATGAGTATAGAAAGGATTACCCTTTTGATGATTTTGTTTGTAGTTCCGTGGTTTCGTCGTTTTGTAAGGTTGGAAAACCAGAAATTTCATTGTGGTTTTTCGATAATGTTGCACGGTCGAAGAGTGTGTGGCGACCGAATCTTGTGAGTTTTACTGCTGTTGTGAATGCTCTTTGTAAGTTAGGGAGGGTTGATGAAGTTTGTGTTTTGGTGAGGAAGATGGAAGAGGATGGGTTGGATTTGGATGTTGTTTTGTATAGTGTTTGGGTTTGTGGGTATGTTGAAGAGAAGATTTTGGTTGAGATTTTTAGGAAGATGAGGGAAATGGTGGAAAAGGGTATATGTCATGATTTTGTTAGTTATACTATACTTATAGATGGGTTTTGTAAGTTAGGTGATGTTGAAAAGTCTTTTACTTTCTTAGCTAAGATGATTAAAGAAGGGATTAGGCCTAATAAGGTTACTTATACTGCGATAATGTCTGCGTATTGTAAGAAGGGTAGGGTAGAGGAAGCATTCCGTGTTTTCGAAAGGATGAAGGATTTGGGAATTGAGTTGGATGAATTTGTGTTTGTAGTTTTGATTGATGGGTTTGGAAGGGTAGGGGATTTTGATCGCGTGTTTCAGCTTCTTGTTGAAATGGAGAAGAGAGGGATTAGTCCCAGTGTTGTTACGTACAATGCGGTTGTAAATGGTTTGTCGAAGTATGGGAGGACACATGAGGCGGATGAGTTTGCGAAAAACGTGACTGCAGATGTGATTACGTACAGCACATTGTTGCATGGGTATACCAAAGAAGAGAATGTTTTGGGGATTTTGCAGACAAAGAAGCGGTTGGAAGATGCTGGTATCTCTATGGATGTTGTAATGTGTAATGTGCTGATCAGAGCACTGTTTATGATGGGTGCTTTTGAAGATGTTTATGCACTTTACAAAGGAATGCCGGAAATGGATCTGGTTCCGAATTCGGCTACCTACTGCACAATGATTGATGGGTATAGCAAGGTTGGTAGAATCGATGAGGCACTTGAGGTCTTTGATGACTTCAGAAAGACGTCAATCTCTTCGTATGCGTGTTACAATAGTATTATTAATGGCCTTTGCAAGAAGGGTATGGTAGAAATGGCCATTGAAGCTTTGCTTGAACTCAATCACAAAGGTCTTGAGTTGGATACAGGGACATATAGGTTGTTAATGAAGACGATTTTCAAAGAAAACAGTTCCAAAGTGGTTTTAGATTTAGTTTGCAGAATGGAAGGTTTGGGGCCAGATATATTTAATAAAGTATGCAATGATTCCTTATTTTTATTATGTAAAAGAGGATTTCTCGATAATGCGAAGCAATTGTGCATGGTGATGAAAAACAAGGGGTTACCTGTCACGTGCAAATCTTATTATTCACTTTTGAGAAGGCTTCTTTGTGTTGTTGGGAATAGGGAGCAAATTCTACCCCTTTTGAATTGCTTTCTGAAAGAGTACGGTCTAGTTGAACCAAAGGTTCAAAAGGTACTCGCACGATACCTTTGTCTGAAAGATGTCGACAGTGCCCTTCGATTTCTTAGAAAAACAGCTTATAATTCTTCAGCAGTCACTTTTCCTGTGTCCATTCTCAAGATTCTCATAAAGGAGGGAAGAGCTTTAGATGCATATAAGTTTCTCATGGGGGTTCAAGATAATTTACCGGTCATGTATGTTGATTACGCCATTGTGATTCATGGCTTATGCAAGGGAGGATATCTTGATAAAGCGTTGGATCTTTGTGCCTTCATCGAAAAGAAAGGGATGAATTTGAACATAGTCGTATATAATTCAATAATAAATGGACTGTGCCATGAGGGTTGTCTTATTGAAGCATTTCGGTTATTTGATTCTCTAGAGAAACTTAATTTGATGACCTCTGAGATAACTTATGCTACATTAATTTACGCTTTATGTAGGGAGGGATATTTGCAAGACGCAGAGCATGTTTTCGCAAAAATGGTCCTCAATGGATTTCAACCAAAAACACAAGTTTACAATTCAATACTTGTTGCTATATCTAAGCGCGGACAGTTAGAGAAAGCATTTGAGCTTCTAAATGATATGGAGACAAAATATATCGAGTTTGACAATTTCACAGTTAGCACTGTAATAAATTGCTATTGCCAGAAAGGCGACATGGAAGGAGCCCTTGAATTCTATTACAAGTTCAAGGGGAAGGATATATTACCTGATTTTTTGGGGTTCTTGTATTTGATAAGAGGTCTATGTACCAAGGGAAGGATGGAAGAAGCCAGGAGTGTCTTGAGAGAAATGCTCCATTCCAAGAATGTCGCAGAGATGATTAACGTAGTCAACAACGAGGTTGATACTGAGTCAATATGTGACTTTCTTGCAACTTTGTGTGAGCAAGGAAGCATTCAAGAAGCTGTTACAGTTCTCAATGAAATCGCATGTGTGTATTTTCCTGTTCAAAGGTTGCTTACTTATAATCAACAGAAGAATTATGAATCAAAGGATGTTGATTCAAAATCTTCCACCTCTCTACCTTCGTGTCGTGAAAGTGGTTTAGATTCTGGATCTTGTGATACCTGGGATGTAAGGAATCATATGACAAGATCCCGACTGCATAGCTTTGACTTCTATTATTCTCAAATTGCTGCACTTTGTACCAAAGGGGAGGTGCAGGAAGCTAATCAATTAGCAAGGAAATGCTTTCTGACCTGA 3168 0.3911 MLFPSTKPFTFSLQSSLKRGITPTPNSITTFFNFLFNLRKFNLIINLFHQFTTNKIQIPHKTHKILTWALLNSHHFNQAEKFMKQNPHTPFGAWDKLIHGLCSTRQNPERILSVLQHCLVNRGVFISKSVFCCVIERFCVLGHVGKAIEVVELMNEYRKDYPFDDFVCSSVVSSFCKVGKPEISLWFFDNVARSKSVWRPNLVSFTAVVNALCKLGRVDEVCVLVRKMEEDGLDLDVVLYSVWVCGYVEEKILVEIFRKMREMVEKGICHDFVSYTILIDGFCKLGDVEKSFTFLAKMIKEGIRPNKVTYTAIMSAYCKKGRVEEAFRVFERMKDLGIELDEFVFVVLIDGFGRVGDFDRVFQLLVEMEKRGISPSVVTYNAVVNGLSKYGRTHEADEFAKNVTADVITYSTLLHGYTKEENVLGILQTKKRLEDAGISMDVVMCNVLIRALFMMGAFEDVYALYKGMPEMDLVPNSATYCTMIDGYSKVGRIDEALEVFDDFRKTSISSYACYNSIINGLCKKGMVEMAIEALLELNHKGLELDTGTYRLLMKTIFKENSSKVVLDLVCRMEGLGPDIFNKVCNDSLFLLCKRGFLDNAKQLCMVMKNKGLPVTCKSYYSLLRRLLCVVGNREQILPLLNCFLKEYGLVEPKVQKVLARYLCLKDVDSALRFLRKTAYNSSAVTFPVSILKILIKEGRALDAYKFLMGVQDNLPVMYVDYAIVIHGLCKGGYLDKALDLCAFIEKKGMNLNIVVYNSIINGLCHEGCLIEAFRLFDSLEKLNLMTSEITYATLIYALCREGYLQDAEHVFAKMVLNGFQPKTQVYNSILVAISKRGQLEKAFELLNDMETKYIEFDNFTVSTVINCYCQKGDMEGALEFYYKFKGKDILPDFLGFLYLIRGLCTKGRMEEARSVLREMLHSKNVAEMINVVNNEVDTESICDFLATLCEQGSIQEAVTVLNEIACVYFPVQRLLTYNQQKNYESKDVDSKSSTSLPSCRESGLDSGSCDTWDVRNHMTRSRLHSFDFYYSQIAALCTKGEVQEANQLARKCFLT* 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3425 1055 Pfam PPR repeat 899 921 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat 378 398 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat 721 748 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 441 475 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 752 786 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 787 821 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat family 752 800 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat family 305 352 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat family 821 870 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat family 513 555 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat family 441 489 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 476 510 IPR002885 -
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 253 368 IPR011990 GO:0005515
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 899 923 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 308 342 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 825 851 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 789 821 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 273 306 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 513 545 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 344 377 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 203 236 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 479 508 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 860 892 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 754 781 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 721 752 IPR002885 -
Mal4g3425 1055 TIGRFAM PPR: pentatricopeptide repeat domain 443 476 IPR002885 -
Mal4g3425 1055 SUPERFAMILY TPR-like 755 963 IPR011990 GO:0005515
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 369 427 IPR011990 GO:0005515
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 271 305 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 201 235 IPR002885 -
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 512 682 IPR011990 GO:0005515
Mal4g3425 1055 MobiDBLite consensus disorder prediction 987 1007 - -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 892 926 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 341 375 IPR002885 -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 822 856 IPR002885 -
Mal4g3425 1055 PANTHER FERTILITY RESTORER-LIKE 48 558 - -
Mal4g3425 1055 Pfam PPR repeat 200 229 IPR002885 -
Mal4g3425 1055 Pfam PPR repeat 266 298 IPR002885 -
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 837 978 IPR011990 GO:0005515
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 711 836 IPR011990 GO:0005515
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 428 511 IPR011990 GO:0005515
Mal4g3425 1055 Gene3D Tetratricopeptide repeat domain 126 252 IPR011990 GO:0005515
Mal4g3425 1055 PANTHER ATPASE EXPRESSION PROTEIN 3 745 1050 - -
Mal4g3425 1055 PANTHER ATPASE EXPRESSION PROTEIN 3 591 648 - -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 306 340 IPR002885 -
Mal4g3425 1055 MobiDBLite consensus disorder prediction 987 1005 - -
Mal4g3425 1055 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 857 891 IPR002885 -
Mal4g3425 1055 PANTHER FERTILITY RESTORER-LIKE 745 1050 - -
Mal4g3425 1055 PANTHER FERTILITY RESTORER-LIKE 591 648 - -
Mal4g3425 1055 PANTHER ATPASE EXPRESSION PROTEIN 3 48 558 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3425 721 963 Glycosyltransferase AT1G05670 29.104 7.81e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3425 - K17964 gmx:100783405 1469.14