Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3368 ATGTATGAAATGCAACAATTTCAGTTTCTTCATCATGATCATCAAATGACAATGAAAATGGATCATATGACGACGAGGAAGAGGGAGACCAAAAAGGCTCCGCCGCCGCCGACGGAGGAAGATAGGGTTCATGTTGTGGATTTGCATGGCATGTCCTTGGACTCACTTCCAAAACTTTCTCTTGATTTAGCTATCATTTCCAAACTCAACTTGTCTAACAACAATCTCCAGAATATTCCGGAGTCGTTAACGGCAAGATTATTGAACTTGGAGATGTTGGACGTGCACTCTAATCAACTCAGATCCCTACCCAATTCCATTGGATGTCTCTCTAAACTTAAAGTTTTGAATGTCTCTGGAAATTTCATCCAATCCCTCCCCGCTACCATTGAGAATTGCAGAGCCTTAGAAGAACTGAATCTCAACTTCAACATGTTGAACATGCTTCCAGACACAATAGGCTTTGAGCTCATAAAACTCAAGAAGCTTGCAGTCAACTCCAACAAGTTGGTGTGTCTTCCTAGCTCCACCTCTCACTTAATGGCTCTTACCATTCTCGACGCACGTTTAAACTGTCTCAGGAGTCTCCCCGAAGACCTTGAGAACCTCGTCAATCTTGAAACACTCAATGTGAGTCAGAACTTCCGGTACTTGGAGTCATTGCCCTACTCCGTAGGACTCCTATTTTCCCTGGTCGAACTAGACATTAGCTACAACAATATCAAAACATTACCCGACTCTATCGGATGCCTCCAAAAGCTCCAAAAGCTAAGCGTGGAGGGAAATCCGCTTAGTTCACCTCCACCGGAGGTGGTGGAGCAGGGATTGCATGTGGTGAAGGAGTATTTGTGCCACAAAATGAACTCAGGTCATCGTACCCCAACCAAGAAGAGATGGTGGATGGTGAAATGTGGGACCTTCAATGGAGACATGATAACTGGGAAACGATCTGAACATAAGGGCTTCAACAAGCTTCATTATCAACCCATGAATGGTCTTGCTTCACCAGGCTTCATGGGGAGATTGTCACCTCTTCGCCTCTTCTCACCGCGTCGTTCCTTGAGTTGA 1068 0.4494 MYEMQQFQFLHHDHQMTMKMDHMTTRKRETKKAPPPPTEEDRVHVVDLHGMSLDSLPKLSLDLAIISKLNLSNNNLQNIPESLTARLLNLEMLDVHSNQLRSLPNSIGCLSKLKVLNVSGNFIQSLPATIENCRALEELNLNFNMLNMLPDTIGFELIKLKKLAVNSNKLVCLPSSTSHLMALTILDARLNCLRSLPEDLENLVNLETLNVSQNFRYLESLPYSVGLLFSLVELDISYNNIKTLPDSIGCLQKLQKLSVEGNPLSSPPPEVVEQGLHVVKEYLCHKMNSGHRTPTKKRWWMVKCGTFNGDMITGKRSEHKGFNKLHYQPMNGLASPGFMGRLSPLRLFSPRRSLS* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3368 355 ProSiteProfiles Leucine-rich repeat profile. 230 251 IPR001611 GO:0005515
Mal4g3368 355 SMART LRR_bac_2 228 247 - -
Mal4g3368 355 SMART LRR_bac_2 203 224 - -
Mal4g3368 355 SMART LRR_bac_2 133 152 - -
Mal4g3368 355 SMART LRR_bac_2 180 199 - -
Mal4g3368 355 SMART LRR_bac_2 63 82 - -
Mal4g3368 355 SMART LRR_bac_2 110 129 - -
Mal4g3368 355 SMART LRR_bac_2 157 176 - -
Mal4g3368 355 SMART LRR_bac_2 87 106 - -
Mal4g3368 355 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 349 - -
Mal4g3368 355 MobiDBLite consensus disorder prediction 21 41 - -
Mal4g3368 355 ProSiteProfiles Leucine-rich repeat profile. 89 110 IPR001611 GO:0005515
Mal4g3368 355 SUPERFAMILY L domain-like 42 269 - -
Mal4g3368 355 SMART LRR_typ_2 134 156 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 228 250 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 251 274 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 157 179 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 63 86 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 180 203 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 87 109 IPR003591 -
Mal4g3368 355 SMART LRR_typ_2 110 133 IPR003591 -
Mal4g3368 355 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 349 - -
Mal4g3368 355 Pfam Leucine rich repeat 230 264 IPR001611 GO:0005515
Mal4g3368 355 Pfam Leucine rich repeat 67 121 IPR001611 GO:0005515
Mal4g3368 355 Gene3D Ribonuclease Inhibitor 155 284 IPR032675 -
Mal4g3368 355 Gene3D Ribonuclease Inhibitor 2 154 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3368 Mal-Chr4 98603814 98607346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3368 69 344 Receptor kinase-like Gene Family AT5G51350 31.034 1.01e-16 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3368 - - lja:Lj6g3v1315120.1 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5205 5 125988572 125993380 Mal4g3368 4 98603814 98607346 PCT