Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2973 ATGGAGTGCGTTGGTGGGAGAAACTTAACTGCAATGGCGTTTTGCATAAGTCCTTCTTCGAGGGTAAGGAGAAAGAAGGTTTGGAGAAGAAGAGGAGCTTCGTCGAACGCAGCGATTCTGCGTTCGAGGTGTTGTTTGAAAGTAGAGGCGAAAGCAGGGGGTGCAGGAAGTGAAAGTTGTGTTGTTGCTAAAGAGGATTATGCGGATGAGGAGGATTTTGTTAAGGCTGGTGGTTCTGAACTTGTTTTTGTTCAAATGCAGCAGAGAAAGTCTATGGAAATGCAATCTAAGCTTGCGGATAAGTTACCACCTATCTCTATTGAAGATGGAATACTTGATCTAGTTGTGATTGGTTGTGGTCCTGCTGGTCTTGCTCTAGCTGCTGAATCTGGCAAGTTAGGATTAAAAGTTGGGCTTATTGGTCCGGATCTCCCTTTTACAAACAATTATGGTGTGTGGGAGGACGAATTTAAAGGTCTTGGACTTGAAGGTTGTATTGAGCATGTTTGGAAGGATACCGTTGTATATATTGATAATAAAGATCCCATTTCAGTTGGACGTTCTTATGGCCGTGTCAGTCGGCATTTGCTTCACGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTGGCTCAAAAGTAGAAAGGATTGTTGAGGCTAGCAATGGTCATAATCATGTTGTCTGTGAATATGATACTGTAGTGCCCTGCAGGCTTGCTACTGTTGCATCAGGAGCAGCTTCAGGGAAACTATTGCAGTATGAAGTTGGGGGTCCAAAGGTGTGTGTACAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAGTCCTTATGAGCCAAACGTGATGGTTTTCATGGATTACAGAGACTATATGAAGAAAAATGTTCAAGGTCTAGAAGCTAACTATCCAACATTTCTTTATGCAATGCCCATGTCTCCTACAAAAGTGTTCTTTGAGGAAACATGTTTGGCGTCAAAAGATGCCATGCCTTTTGATTTATTAAAGAAAAAGCTCTTATCAAGATTAAATACGATGGGGATCAAAATTTCAAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGTGGATCCTTACCAAACACAGAGCAGAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGCTACTCTGTTGTGAGATCATTGTCGGAAGCTCCGCAATATGCTTCAGTAATTGCTAATATTTTGAATGAGGGTAATGCAAGGGACATTGTTACTTATGGAAGAAGTAATGAGAATCCATCCATGCGAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGGCAGAGATCATTCTTTCTTTTTGGATTAGCACTAATTGTGCAGCTGGACATTGAGGGCACTAGAACATTCTTTCGTACTTTCTTCTGCTTACCTGAGTGGATGTGGCAAGGATTTCTTGGTTCTTCTCTATCCTCGAAAGATCTTCTATTATTTGCACTCTACATGTTCGTAATAGCACCAAATAACTTAAGAATGTCTCTAGTCAGACATCTGCTTTCAGATCCTACAGGGTCGACTATGATAAAAACCTACTTGACGATATAA 1602 0.4182 MECVGGRNLTAMAFCISPSSRVRRKKVWRRRGASSNAAILRSRCCLKVEAKAGGAGSESCVVAKEDYADEEDFVKAGGSELVFVQMQQRKSMEMQSKLADKLPPISIEDGILDLVVIGCGPAGLALAAESGKLGLKVGLIGPDLPFTNNYGVWEDEFKGLGLEGCIEHVWKDTVVYIDNKDPISVGRSYGRVSRHLLHEELLRRCVESGVSYLGSKVERIVEASNGHNHVVCEYDTVVPCRLATVASGAASGKLLQYEVGGPKVCVQTAYGVEVEVENSPYEPNVMVFMDYRDYMKKNVQGLEANYPTFLYAMPMSPTKVFFEETCLASKDAMPFDLLKKKLLSRLNTMGIKISKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPQYASVIANILNEGNARDIVTYGRSNENPSMRAWNTLWPQERKRQRSFFLFGLALIVQLDIEGTRTFFRTFFCLPEWMWQGFLGSSLSSKDLLLFALYMFVIAPNNLRMSLVRHLLSDPTGSTMIKTYLTI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2973 533 Pfam Lycopene cyclase protein 113 510 - -
Mal4g2973 533 PANTHER BNAC09G53690D PROTEIN 1 479 - -
Mal4g2973 533 SUPERFAMILY FAD/NAD(P)-binding domain 111 506 IPR036188 -
Mal4g2973 533 TIGRFAM carotene-cycl: lycopene cyclase family protein 113 513 IPR010108 GO:0016117|GO:0016705
Mal4g2973 533 Gene3D - 111 439 IPR036188 -
Mal4g2973 533 PANTHER - 1 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2973 Mal-Chr4 89044008 89051168 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2973 K06444 - gmx:100790686 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2973 4 89044008 89051168 Mal4g2973 4 89044008 89051168 ECH