Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2961 ATGGGTGAAGAAGTAATCATTATTCATGGTGAAAATGGAGTAAGGGATGATGATGATGAGAAGGTGGAAGTGAATATATATCCTCTAAATTGTTACTATTTTGGATCAAAAGATGCTATTCCTTTCAAAGATCACCACTCTCTTCAAAGATTCAAATCCAATTATGATGCCCGTGGAATGCGAACTTGTGTTGAAGCTGTTATGATGGTTGAGTTGTTCAAACATCCACATTTGTTGCTGTTGCAATTAAAAAATTCCATCTTTAAACTTCCTGGTGGCCGTTTAAGGCCAGGTGAATCAGATACCGATGGGTTGAAGCGTAAGCTAGCAAGGAAGCTTTCTGTTGATGAAGATGGGGTTGGGGCAGATTGGGAGGTGGGAGATTGCCTTGGAATGTGGTGGAGGCCTGATTTTGAAACATTAATGTACCCTTTCTTACCACCTAATGTTAAACATCCAAAGGAGTGTACGAAACTCTTCCTTGTAAGGCTTCCGGAAAGTCGAAGGTTCACAGTGCCAAAGAACATGAAGTTGCTTTCAGCCCCATTGTGTCAAATTCGTGACAATCACAAGACATACGGGCCAATTATATCTGCGGTCCCCCAGCTGCTGTCAAAATTCTCTTTCAATATGATCGAATTTTAA 645 0.4078 MGEEVIIIHGENGVRDDDDEKVEVNIYPLNCYYFGSKDAIPFKDHHSLQRFKSNYDARGMRTCVEAVMMVELFKHPHLLLLQLKNSIFKLPGGRLRPGESDTDGLKRKLARKLSVDEDGVGADWEVGDCLGMWWRPDFETLMYPFLPPNVKHPKECTKLFLVRLPESRRFTVPKNMKLLSAPLCQIRDNHKTYGPIISAVPQLLSKFSFNMIEF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2961 214 SUPERFAMILY Nudix 47 146 IPR015797 -
Mal4g2961 214 PIRSF CPSF-25 8 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
Mal4g2961 214 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 15 213 IPR016706 GO:0003729|GO:0005849|GO:0006378
Mal4g2961 214 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 22 211 - -
Mal4g2961 214 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 15 213 - -
Mal4g2961 214 Pfam Nucleotide hydrolase 23 207 IPR016706 GO:0003729|GO:0005849|GO:0006378
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2961 Mal-Chr4 88818029 88820521 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2961 K14397 - gmx:100791216 317.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g2961 4 88818029 88820521 Mal4g2961 4 88818029 88820521 ECH