Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2662 ATGGAAGGAGGTGTTCCAGAAGCAGACATGTCTGCTTTCAGAGAATGTTTATCACTCTCATGGAAGAATCCATATGTTCTTCGTCTAGCTTTTTCAGCTGGAATTGGTGGCCTTCTTTTTGGCTATGATACTGGAGTTATATCTGGAGCTCTTTTGTATATTAGAGATGATTTCAAGGCTGTAGATAGGAAGACATGGCTTCAGGAAGCCATAGTGAGTACAGCAATTGCTGGAGCAATTATTGGTGCTGCAGTTGGTGGATGGATCAACGATCGATTTGGAAGGAAAATATCGATAATTGTTGCAGATACCCTCTTTTTAATAGGGTCAATTATCTTGGCTGCTGCTCCAAATCCAGCCGTTCTCATTGTTGGTAGAGTATTTGTTGGTCTTGGGGTGGGGATGGCTTCAATGGCTTCCCCTTTGTACATCTCCGAGGCTTCGCCAACTCGAGTTAGAGGTGCTCTTGTTAGTCTCAACAGTTTTCTAATCACTGGTGGACAATTCCTTTCCTATCTCATCAACTTGGCCTTTACTAAGACACCAGGAACATGGAGGTGGATGTTAGGTGTTGCAGCAGCACCTGCTGTGATACAGATTGTACTCATGTTGTCACTCCCCGAGTCACCTCGTTGGTTGTACCGCAAGGGCAAGGAGGAAGAAGCAAAACTAATTCTGAAAAAGATATACGAGGTCGAGGACTACGACAATGAAATTCAAGCATTGAAAGAATCAGTTGATATGGAGCTTAAGGAAACAGAGAAAATAAGCATAATGCAGCTTCTGAAAACAACATCAGTAAGAAGAGGTTTATATGCAGGTGTTGGCCTTGCATTTTTCCAACAATTTGTCGGTATCAATACCGTGATGTACTACAGTCCTTCCATTGTTCAGTTGGCTGGTTTTGCATCAAAAAGAACAGCACTTCTTCTGTCACTAATCACTTCTGGCCTTAATGCATTTGGTTCAATTTTGAGCATATATTTTATTGACAAAACTGGAAGGAAGAAACTTGCATTGATAAGTTTAACTGGTGTTGTGCTCTCTTTGACTCTTTTAACTGTTACTTTTCGTGAAAGCGAAATTCATGCACCAATGGTTAGTGTCATTGAAAGTACTCATTCCAATAACACATGCCCTGAATTCAAAACAGCAGCTATGAACAATCATAATTGGAATTGTATGAAGTGTATAAGGGCTTCATCTACTTGTGGATTTTGTGCTGCTTCTGGTGACATGAACAAGCCAGGTGCATGTTTAGCTTCCAATGACAATGCAGAAGATGTGTGTGGCATTGACCACAGAGCATGGTACACAAAAGGTTGTCCAAGCAACTATGGTTGGCTTGCTATAATAGGCCTTGCACTCTACATCATATTCTTCTCACCCGGGATGGGAACTGTTCCATGGGTTATTAACTCTGAAATCTATCCATTGAGATATCGAGGAATCTGTGGAGGAATAGCATCAACAACTGTTTGGGTTTCCAACCTCGTTGTTTCGCAATCCTTCTTATCTTTGACTGTTGCAATTGGACCAGCTTGGACTTTCTTGATATTTGCAGTTATTGCTATTGTTGCCATTTTGTTTGTCATTGTTTTTGTGCCTGAGACTAAAGGGGTTCCAATGGAGGAAGTGGAGAGTATGCTTGAAAAGAGAGCTGTGCAGATTAAGTTTTGGCAGAAGAGAGATTCTGGTCCTGAGAAGCATTGA 1713 0.4139 MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRKTWLQEAIVSTAIAGAIIGAAVGGWINDRFGRKISIIVADTLFLIGSIILAAAPNPAVLIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKTPGTWRWMLGVAAAPAVIQIVLMLSLPESPRWLYRKGKEEEAKLILKKIYEVEDYDNEIQALKESVDMELKETEKISIMQLLKTTSVRRGLYAGVGLAFFQQFVGINTVMYYSPSIVQLAGFASKRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALISLTGVVLSLTLLTVTFRESEIHAPMVSVIESTHSNNTCPEFKTAAMNNHNWNCMKCIRASSTCGFCAASGDMNKPGACLASNDNAEDVCGIDHRAWYTKGCPSNYGWLAIIGLALYIIFFSPGMGTVPWVINSEIYPLRYRGICGGIASTTVWVSNLVVSQSFLSLTVAIGPAWTFLIFAVIAIVAILFVIVFVPETKGVPMEEVESMLEKRAVQIKFWQKRDSGPEKH* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2662 570 TIGRFAM SP: MFS transporter, sugar porter (SP) family 20 358 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mal4g2662 570 Coils Coil 232 252 - -
Mal4g2662 570 Pfam Sugar (and other) transporter 444 549 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mal4g2662 570 Pfam Sugar (and other) transporter 30 358 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mal4g2662 570 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016021|GO:0022857|GO:0055085
Mal4g2662 570 Gene3D MFS general substrate transporter like domains 20 373 IPR036259 -
Mal4g2662 570 SUPERFAMILY MFS general substrate transporter 18 547 IPR036259 -
Mal4g2662 570 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 539 IPR020846 GO:0022857
Mal4g2662 570 PANTHER GENERAL SUBSTRATE TRANSPORTER 1 570 - -
Mal4g2662 570 Gene3D MFS general substrate transporter like domains 429 558 IPR036259 -
Mal4g2662 570 CDD MFS_HMIT_like 32 537 - -
Mal4g2662 570 PRINTS Sugar transporter signature 474 486 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mal4g2662 570 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mal4g2662 570 PRINTS Sugar transporter signature 281 291 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mal4g2662 570 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mal4g2662 570 PRINTS Sugar transporter signature 451 472 IPR003663 GO:0016020|GO:0022857|GO:0055085
Mal4g2662 570 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 1 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2662 Mal-Chr4 73273780 73279851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2662 1 570 Organic Solute Cotransporters AT1G30220 68.284 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2662 K08150 - gmx:100785028 892.108