Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2593 ATGGCGAAATTGAAGATAGCAGGAACATGGTCAGGTGTGTTAGAAGAAGTCGATTTAGAGAAATGGACTATTTCTTCATTACGTGAAGAGGTTGCGAAGCGATCCAACTGCGAAAACCCTCACTTCATCAACCTGATTTCTGCTGGTAGAATTCTCAAGGATGATGATAATCAAACCCTAACCCTAACCCAATTAGGTATCAAAAATAACTCCAAGATTCTCGCTACTCTCACTTCTCCTCAACAGGGTCAGTCTCTTGTTGTTCAGGAACAAAGCTCTCATAGGCTTGCACGTATCAGGGCAGCTGCAACTGCATTGGCTGAAAGGCATGCAGATGGTTCATTGCCTCTTGAAGACTTTAACATAGAAGTTGAAGATCAGAGTGGACAAAAAGTCCGCTTAGGTTCAGAGACTGATCAGAGGGCAGTAATGATGGGACTGATGCTTCATGCAAAGGGGAAGCGTCTTATCAGAAAGGGAAATTACAAAGATGCGCTTGAAGTCCTTATCATGGGAGAGGAGTCATTCTCTATTTGTGATCCAAAAGTCATTGAGCTTATTGACAATGTTCCAATACTGCAAATTGACATGGTATGGTGCTACTTCATGCTACGAGACATTAGATGGTTATCAGATGCAGGAAAGCGTCTTGAAATGGCTAGGGCAGGAATTGAACGTGCTCATGGGAAGGATTCTCTCCGCCTCAGACTCTTACAAGGTGGTCGCTATCCAGAGCTTGCATTGCATTTGAGACTAGAGCTGCTTGAAGGGGTGGTGGCATTTCATTCTGGCCAGTTGGAGAAATCAAGGCAAGCATTAGCTTCTGCAAAAGCGAAGTTTGTTCAGCTGCAAGTGCCAGATGAGGCCTTATCACTTGTTATGAGCATGGGCTACAACCAACGGGATGCAAAGAGAGCACTGCGAATGAACAATCAAGATGTTGGGGGTGCCATTGATTTCCTTGTTGAGGAGAAGGCTAAGAAAATGCAGAAAATGGAGGAAGATTTAAAAAGAAGAGATGAAATTATGGAACAAAAGCGGTTCGGGGTGACCCCCTTAAAGAAGGCAGTGGATCTGGAGAGACTGAATGAATTGGTCACTATTGGGTTTGAGAAGGAGCTTGCTGCTGAAGCCCTTAGAAGAAATGAAAATGATACTCAGAAGGCATTGGATGATTTGACGAATCCAGAAACTAATTCTGATTTACAGGTTAAGATCGAGTCAAGGAAAAGGAAAAGAGAGAAACAAGAGAAAGAATCTGGCATTGAAAAAGTTGTGCAAATGGGTTTTGAAAGATCAAGAGTGGCCGCAGCTTTTGAAGAAGGCGGGAATTTAGAAGAAGTATTGCAAAGACTGACAGCACAGCCCGTGGCGGAAAATATGCAACCTCAAGTGAATTCACTTGCTCCTTCCAATGGTATTGGAAGTTCATCTAACCCTTCACCAGACAATCTTAGTTCTGTTATTCCAGGCATAATGAATGAGGTTGAAGATCACAACAAAATAGAAGAAAGGGATGTGGAGATGGAAGATGAGCTGTCAGCAGATATAGCTAAAGGAGATGCCTTTACTGATTATGACATTGAAGTTAATATTGAAGGGGAAGCCATAACTGAGTACCTGTCTATGGTTGAGTCAGCAGGCATTGCTTCCAAATAA 1659 0.4286 MAKLKIAGTWSGVLEEVDLEKWTISSLREEVAKRSNCENPHFINLISAGRILKDDDNQTLTLTQLGIKNNSKILATLTSPQQGQSLVVQEQSSHRLARIRAAATALAERHADGSLPLEDFNIEVEDQSGQKVRLGSETDQRAVMMGLMLHAKGKRLIRKGNYKDALEVLIMGEESFSICDPKVIELIDNVPILQIDMVWCYFMLRDIRWLSDAGKRLEMARAGIERAHGKDSLRLRLLQGGRYPELALHLRLELLEGVVAFHSGQLEKSRQALASAKAKFVQLQVPDEALSLVMSMGYNQRDAKRALRMNNQDVGGAIDFLVEEKAKKMQKMEEDLKRRDEIMEQKRFGVTPLKKAVDLERLNELVTIGFEKELAAEALRRNENDTQKALDDLTNPETNSDLQVKIESRKRKREKQEKESGIEKVVQMGFERSRVAAAFEEGGNLEEVLQRLTAQPVAENMQPQVNSLAPSNGIGSSSNPSPDNLSSVIPGIMNEVEDHNKIEERDVEMEDELSADIAKGDAFTDYDIEVNIEGEAITEYLSMVESAGIASK* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2593 552 Coils Coil 399 419 - -
Mal4g2593 552 CDD UBA 362 391 - -
Mal4g2593 552 MobiDBLite consensus disorder prediction 403 420 - -
Mal4g2593 552 SUPERFAMILY Ubiquitin-like 21 77 IPR029071 -
Mal4g2593 552 SUPERFAMILY UBA-like 259 324 IPR009060 GO:0005515
Mal4g2593 552 ProSiteProfiles Ubiquitin domain profile. 23 82 IPR000626 GO:0005515
Mal4g2593 552 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 356 396 IPR015940 -
Mal4g2593 552 Gene3D - 14 85 - -
Mal4g2593 552 Gene3D - 286 325 - -
Mal4g2593 552 Gene3D - 359 396 - -
Mal4g2593 552 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 21 547 IPR039749 -
Mal4g2593 552 SMART uba_6 418 454 IPR015940 -
Mal4g2593 552 SMART uba_6 358 395 IPR015940 -
Mal4g2593 552 SMART uba_6 286 323 IPR015940 -
Mal4g2593 552 MobiDBLite consensus disorder prediction 387 420 - -
Mal4g2593 552 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 284 324 IPR015940 -
Mal4g2593 552 SUPERFAMILY UBA-like 355 398 IPR009060 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2593 - - gmx:100792972 795.423