Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2294 ATGGCGGAAGAGAACAACGAAGCGGAAATCCAAATACGAACCCTAACCGGTGAATCTATCACTCTTCACACCACTCCCTCTTCCACCGTTCAACATCTCAAGCTTCTTCTCAACCACTCTTTCCCTCCCGCCATCAATTCCCCCAATTTCCATCTCTTTTTCAAGGGCAATAAATTGCAATTGCATGATGAAATTGGTTCTTATCACATCGAAAGCAGGGAGTTTGTGGTTTTGATTCCATTCGTCAAGAAGGAAAAAACTCGAACCACGAATTTGGATTTGGGTGTGTCTTCTCCGAATGTTGCTTGCAATGCTTCAACTTCTAATCTAGCAGATACAACATGGTCCAATATAATGGAGGAATTGTCAGAATTGCGCGAAACCACCGTAGAAATTGATGGTAGTAAAGAGAAAAGGGGTTTGGGTTCTGAGAAGGAGATAGATCTACCTTATCATATGATTTTGAATACATTGGATTATACTAATGAGAGTGCTCTTGGAGAGAGTAGTTGTGAGGTTTTTTCGAAGGTTTTGGAGTCGGTAAATTGTTTATCTGATTTGCCTCTTGGACATTGCAAGTTGTTGAAGAGAGCATGTTTGAAGGGCAATGGTGGTGGTGGTGTTACTTGCTTGTGTCCACCGTGGTTGAAGATGGTCGTGAAGTCGTTTGCTTTCATAAACATTTTTTCCGCGTTCCTTCATTTGCAGGGTAGGAAGGTAACCATGAGTCTACTGGAAGAAGCACTTGATCAGCTTGGGAAGTTCGGTGTTAAACTTGGCCTCCATGACATGAAGCGTCTTTCCTTTCTTTGTCCTCAGATAGTATGTTTTGTAGATGACATAGAGAAGGCAAGTTTTGGTGATGTCATTGTTGTAGTAAATCGTTCAACTGGCTGCAAAGATCAAATTGAAGATAATCTTAAAAGAGCTCGCAGGTCACTGTATGTTTCAAAGATTGTCAGTACATTAATGAGAAGGGACAGTTCTTTTCGAAAATATTTGGGTTGGGCTTTTGAGCAGCTTCAGTTTGAAATTGGAGATGAGATGAACGTGAGAATTTCGTTCGAAGAATTACTTGCTGCAGTTAAGGACTGTGACTTTACCAGAAAAGAAAACAAATCAAAACGTGTAAAGAGAAGCTCAACTTCCTCAAGATCTGACATGGACCGCATCGGGTGTCATGACACAAAGTCATTAATGGCTGTGGACATGGTTGAACATCTTAAGAAAGGAATTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAAAAGCCATTTACAGTGACATCCCAGCGGAACTATCAGAGAAAATGAGATCTGCACTAAAGTCTATTGGAGTTTCCAAATTGTATAGTCACCAGGCAGAGTCTATACAAGCCTCCCTTCTCGAGAAGAATGTTGTTGTGGCTACAATGACATCTAGTGGAAAATCTCTTTGCTACAATCTGCCCGTTCTAGAAGAGTTGTTTAACAATTCATCGTCATGTGCTTTGTACATATTTCCTACAAAGGCATTAGCTCAAGATCAACTAAGATCTTTATTACACATGACGAAAGAATTTGATGTTGACTTAAATATTGGTATATATGATGGTGACACTTCACATAGTGAAAGGACATGGCTACGTGATAATTCTAGACTGTTAATTACAAATCCAGATATGTTACACATAACAATCTTGCCCCACCATCGGCAATTTGGTCGGATTTTATCGAATCTAAGGTTTCTGGTAATTGATGAAACTCATACCTACAAGGGAGCATTTGGAAGTCATACCGCTCTTATATTAAGGAGGCTTAGGCGACTCTGCTCACATGTATATGGAGCTGTTCCTTCTTTTATTTTCTCTACTGCAACTTCTGCGAATCCTCATGAGCATTCTATGGAACTTGCAAATTTACCCACAGTGGAGTTATTTCAGAAAGATGGAAGTCCATCTGCAAGAAAACTTTTCATCCTTTGGAATCCTGTTTTGCGCCCAAAAGCTGTATCCAAGAAAGCTCTCTTTGCTATGGATAATGATCAGTTGCCAGATGAAAGTTCCAATTTTGTTCGTTCAAGCCCAATCATGGATGTTTCACACCTTCTTGCAGAAATGGTTCAGCATGGTCTTCGCTGCATTGCATTTTGTAAATCAAGGAAACTTTGCGAGCTTGTTTTAATTTATACACGTGAGATTCTTCATGAGACAGCCCCGCATCTACTGGATTCCGTATGTGTATATCGTGGTGGCTACATTGCAGAGGAACGAAGAAAAATAGAGAGTGCATTATTTGGTGGTAAAATTTGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGACGTCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTTTGGCAACAAGCTGGTAGGGGTGGGAGGAGAGATAGACCATCTCTTGCTATATATGTTGCATTTGGTGGACCACTTGATCAATACTTCATGAAAAATCCTAGGAAACTTTTTGAAAGACCAATTGAATGCTGTCACATTGATTCCCAAAACAAGCAGGTTCTTGAACAGCATTTGGTCTGTGCAGCTCATGAACACCCTCTGAATGTGCAGTATGATGAGCAGTATTTTGGTGCTTGCTTAGAGAGTCTTTTGAATTCTCTAAAAGATAGAGGATACTTATGTTCTGATTTGTCTAATTCTTCTAGAATTTGGAACTACATTGGCCCTAAGAAATTACCTTCACAACAAGTCAATATCCGAGCAATAGAAACTGTTAGATACAGTGTCATAGATCAGAAAAAGAAAGAAGTCCTAGAAGAGATAGAGGAAAGCAAGGCTTTCTTTCAGGTATACGAAGGTGCAGTGTACTTGCGTCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAGCAAAACTGCTTTCTGCAAAGAGGCTGATCTGAAGTATTATACCAAGACTCGAGATTACACCGATATCCATGTCATTGGGGGTAATATTGCTTATCCAGTAATTGATTCCACCATGTTTTCAAGAACAAATGTCCGTGCTAATGTATGCCAAGTGACAACTACTTGGTTTGGATTTTATCGTATTTGGAGAGGAAGCAATCAAATCATTGATGCTGTTGATTTAGCACTTCCTCCATATTCATACGAGTCACAGGCAGTCTGGGTACCTGTGCCACAGTCTATAAAAGAAGCAGTGATCAAGCAAAATTATGATTTTCGCGGAGGTTTGCATGCCGCTTCTCATGCTGTTTTACACGTAGTGCCTTTACATATAATGTGCAACTTGTCTGATTTGGCTCCTGAGTGTCCAAATCCTCATGACAGCCGATATTATCCTGAAAGAATCTTAATATATGATCAACATCCTGGAGGGTCTGGAATTTCAGTACAGGCTCAACCTCATTTCACAAAGTTCCTGGCAGCTGCTCTAGAAGTGCTCACATGTTGCCGCTGTTCGGCTGAAGTAGGTTGCCCTAATTGTGTTCAGAGCTTTGCTTGCCACGAGTATAACGAGGTTTTGCACAAGGATGCGGCCATTATGATTATTAAGGGTATTCTAGATGCAGAGAACTAG 3588 0.4041 MAEENNEAEIQIRTLTGESITLHTTPSSTVQHLKLLLNHSFPPAINSPNFHLFFKGNKLQLHDEIGSYHIESREFVVLIPFVKKEKTRTTNLDLGVSSPNVACNASTSNLADTTWSNIMEELSELRETTVEIDGSKEKRGLGSEKEIDLPYHMILNTLDYTNESALGESSCEVFSKVLESVNCLSDLPLGHCKLLKRACLKGNGGGGVTCLCPPWLKMVVKSFAFINIFSAFLHLQGRKVTMSLLEEALDQLGKFGVKLGLHDMKRLSFLCPQIVCFVDDIEKASFGDVIVVVNRSTGCKDQIEDNLKRARRSLYVSKIVSTLMRRDSSFRKYLGWAFEQLQFEIGDEMNVRISFEELLAAVKDCDFTRKENKSKRVKRSSTSSRSDMDRIGCHDTKSLMAVDMVEHLKKGIGSEGQIVHIEDICARKAIYSDIPAELSEKMRSALKSIGVSKLYSHQAESIQASLLEKNVVVATMTSSGKSLCYNLPVLEELFNNSSSCALYIFPTKALAQDQLRSLLHMTKEFDVDLNIGIYDGDTSHSERTWLRDNSRLLITNPDMLHITILPHHRQFGRILSNLRFLVIDETHTYKGAFGSHTALILRRLRRLCSHVYGAVPSFIFSTATSANPHEHSMELANLPTVELFQKDGSPSARKLFILWNPVLRPKAVSKKALFAMDNDQLPDESSNFVRSSPIMDVSHLLAEMVQHGLRCIAFCKSRKLCELVLIYTREILHETAPHLLDSVCVYRGGYIAEERRKIESALFGGKICGVAATNALELGIDVGEIDVTLHLGFPGSIASFWQQAGRGGRRDRPSLAIYVAFGGPLDQYFMKNPRKLFERPIECCHIDSQNKQVLEQHLVCAAHEHPLNVQYDEQYFGACLESLLNSLKDRGYLCSDLSNSSRIWNYIGPKKLPSQQVNIRAIETVRYSVIDQKKKEVLEEIEESKAFFQVYEGAVYLRQGKTYLVEKLDLSSKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVIDSTMFSRTNVRANVCQVTTTWFGFYRIWRGSNQIIDAVDLALPPYSYESQAVWVPVPQSIKEAVIKQNYDFRGGLHAASHAVLHVVPLHIMCNLSDLAPECPNPHDSRYYPERILIYDQHPGGSGISVQAQPHFTKFLAAALEVLTCCRCSAEVGCPNCVQSFACHEYNEVLHKDAAIMIIKGILDAEN* 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2294 1195 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 696 854 IPR001650 -
Mal4g2294 1195 Pfam Ubiquitin family 10 78 IPR000626 GO:0005515
Mal4g2294 1195 CDD Ubl_ubiquitin_like 10 79 - -
Mal4g2294 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 468 818 IPR027417 -
Mal4g2294 1195 Gene3D - 427 644 IPR027417 -
Mal4g2294 1195 CDD DEXHc_Hrq1-like 454 635 - -
Mal4g2294 1195 Pfam DEAD/DEAH box helicase 456 625 IPR011545 GO:0003676|GO:0005524
Mal4g2294 1195 Gene3D - 691 819 IPR027417 -
Mal4g2294 1195 Pfam Helicase conserved C-terminal domain 699 809 IPR001650 -
Mal4g2294 1195 SMART ultradead3 450 656 IPR014001 -
Mal4g2294 1195 ProSiteProfiles Ubiquitin domain profile. 8 79 IPR000626 GO:0005515
Mal4g2294 1195 CDD SF2_C_Hrq 656 820 - -
Mal4g2294 1195 Pfam MrfA Zn-binding domain 1084 1166 IPR018973 -
Mal4g2294 1195 SMART helicmild6 730 811 IPR001650 -
Mal4g2294 1195 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 462 643 IPR014001 -
Mal4g2294 1195 Gene3D - 9 94 - -
Mal4g2294 1195 SUPERFAMILY Ubiquitin-like 3 82 IPR029071 -
Mal4g2294 1195 PANTHER ATP-DEPENDENT HELICASE HRQ1 22 1194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2294 Mal-Chr4 55636644 55661228 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2294 - - cam:101511069 2025.75