Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1729 ATGATGTCTGTCACTAGCAAAAGCATTGATTTTTTTGGTAAGAACTTGGTTTCTTGTGGCTGTTCTTCCAATGCTTCTTTTCATAGGTATGAGGTGAAGAATTATGCTAAGGTGAATTCTAAAGGGTGTAGAAATGGAGCTCGTAAATTGGTTTGTTGTAAGAAGAGGAACACTCCTCAATATCGTGTTTCTTCTATGGAGACTGCAGAGCCTACTTTGAATGGTGGAACTCAAGCAATTAAAGACCTTGCAAAAGGATTGAACTTGAAGAGTTATTCAGAAACCCCTATTTCACCTAATAGGTTGTTTGAAGTAGTCTCTGATGATCTTCTAACACTCAATAAAAATCTTCAATCTATTGTAGGCGCAGAAAATCCAGTTTTAATATCTGCAGCTGAGCAGATCTTTAGTGCTGGTGGGAAGAGGATGAGACCAGCTCTTGTGTTCTTGGTGTCAAGGGCGACCGCAGAGCTACACGGCCTTGAGGATCTTACTGTAAAGCATCGACGTTTAGCTGAGATAGTTGAAATGATTCATACTGCAAGTTTGATACATGATGATGTGTTAGATGAGAGTGACCTAAGAAGAGGGAAGGAAACTGTTCATCAAATGTTTGGAACAAGAGTGGCAGTGCTGGCTGGAGACTTCATGTTTGCACAGTCATCATGGTATCTCGCCAACCTTGAAAACATTGAAGTCATTAAACTTATCAGCCAGGTGATTAAAGATTTTGCTAGTGGAGAAATAAAGCAAGCTTCTAGCTTGTTTGATTGCGATGTTCAACTCGACGAGTATCTAATCAAGAGTTATTTTAAGACAGCCTCCTTGATTGCCGCCAGTGTAAAAGGAGCTGCGGTTTTCAGCGGTTCTGACAGCAGCCTGACAGAGAAAATGTTCGAATACGGGAAGAATCTCGGTCTCTCCTTCCAAGTTGTTGACGACATATTGGATTTCACACAATCAGCAGAACAACTTGGAAAGCCTGCTGGCACGGACCTCGCCAAAGGTAACCTGACCGCTCCCGTAATTTTCGCATTGGAGAAAGAACAAAAATTGAGGGATATCATTGAGTCTGAATTTAGCGAGATTGGTTCTCTGGACGAAGCGATCAAGTTGGTTAAGAGTTGTGGGGGAATCGAAAGAGCACAAGAGTTGGCGAAAGAGAAAGCTGATCTTGCTATTCAAAGTCTTCAATGTCTTCCTCAAAGTGTGTATCGTTTAGCTCTTGAGGACATGGTGACATATAATCTTCAAAGGATTGCATAA 1266 0.4147 MMSVTSKSIDFFGKNLVSCGCSSNASFHRYEVKNYAKVNSKGCRNGARKLVCCKKRNTPQYRVSSMETAEPTLNGGTQAIKDLAKGLNLKSYSETPISPNRLFEVVSDDLLTLNKNLQSIVGAENPVLISAAEQIFSAGGKRMRPALVFLVSRATAELHGLEDLTVKHRRLAEIVEMIHTASLIHDDVLDESDLRRGKETVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIKQASSLFDCDVQLDEYLIKSYFKTASLIAASVKGAAVFSGSDSSLTEKMFEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEQKLRDIIESEFSEIGSLDEAIKLVKSCGGIERAQELAKEKADLAIQSLQCLPQSVYRLALEDMVTYNLQRIA* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1729 421 ProSitePatterns Polyprenyl synthases signature 2. 305 317 IPR033749 -
Mal4g1729 421 PANTHER SOLANESYL DIPHOSPHATE SYNTHASE 2, CHLOROPLASTIC 5 420 - -
Mal4g1729 421 Gene3D Farnesyl Diphosphate Synthase 98 420 IPR008949 -
Mal4g1729 421 TIGRFAM prenyl_cyano: solanesyl diphosphate synthase 98 420 - -
Mal4g1729 421 SUPERFAMILY Terpenoid synthases 101 419 IPR008949 -
Mal4g1729 421 SFLD Isoprenoid Synthase Type I 132 415 - -
Mal4g1729 421 PANTHER GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5 420 - -
Mal4g1729 421 CDD Trans_IPPS_HT 123 419 IPR000092 GO:0008299
Mal4g1729 421 Pfam Polyprenyl synthetase 127 372 IPR000092 GO:0008299
Mal4g1729 421 ProSitePatterns Polyprenyl synthases signature 1. 183 197 IPR033749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1729 Mal-Chr4 30755814 30760288 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1729 K05356 - gmx:100783538 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1729 4 30755814 30760288 Mal4g1729 4 30755814 30760288 ECH