Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1702 ATGAACCACACAGCGCTTTCACAACGAAACCATTACCACCCCACAAATCAACCAAACCCAATCATTTTCACCACCATAAAAAATCCAATCCAATTCCTTCGATTCAACAACCCAAATCACCAAAACGACAAACAAAATCTCCCAGTTTTGCGTTTCGCGGTAAACCCATCCTCACAGGTCCCACCAGTCGTTGTAGTCGGATCCGCCAATGCCGACATTTACGTCGAGATCGACCGCCTCCCGAAGGAAGGCGAAACGATCTCCGCGAAAAATGGGCAGACTTTAGCCGGCGGGAAAGGTGCTAATCAAGCTTGCTGCGGTGCTAAATTATCACATCCGACTTACTTTGTTGGTCAGGTTGGGAACGATGCTCATGGAAATCTCATTGCCGATGCACTTCGAGAGGGTGGTGTTCGCCTCGATTATCTCACTGTTGTGCCTTCTGCTCCGACTGGTCATGCCGTTGTTATGCTTCAGTCTAGTGGCCAGAATTCAATTGTCATTGTTGGAGGTGCTAATGTGAGTTGTTGGCCTCAGACTCTGCCACGTCAGCATTTGGAGGTTGTTTCCTCTGCTGGGATTGTTCTGTTGCAGAGGGAGATCCCTGATTTTGTTAATATTCAAGTGGCAAAGGCTGCAAGGAATGCTGGTGTTCCAGTAATATTTGATGCCGGGGGAATCGATGCACCTATTCCACAAGAATTACTGGATTTTGTTGATATTTTTAGTCCCAATGAAAGTGAACTAGGTCGCCTTACAGGACTTTCAACTGAAAGTTTTGAAGAGATTACACAGGCTGCGGCAAAATGCCATAAATTGGGTGTTAAGCAAGTTCTCGTGAAACTTGGTGCCAAAGGATCTGCCCTTTTCATAGAAGGAGAAGAACCAATTCAGCAACCTGCCATTTTTGCTAAAACAGTCATTGATACAACTGGAGCTGGTGATACTTTCACTGCTGCTTTTGCTGTGGCCTTGGTGGAGGGCAAGTCCAAAAAGGAATGCCTCAGATTTGCCGCTGCTGCAGCTTCTCTTTGTGTTCAAGTTAAGGGAGCCATTCCCAGCATGCCAGATAGGAAATCTGTTCTCGAACTTCTTAATCATCATTGA 1107 0.4616 MNHTALSQRNHYHPTNQPNPIIFTTIKNPIQFLRFNNPNHQNDKQNLPVLRFAVNPSSQVPPVVVVGSANADIYVEIDRLPKEGETISAKNGQTLAGGKGANQACCGAKLSHPTYFVGQVGNDAHGNLIADALREGGVRLDYLTVVPSAPTGHAVVMLQSSGQNSIVIVGGANVSCWPQTLPRQHLEVVSSAGIVLLQREIPDFVNIQVAKAARNAGVPVIFDAGGIDAPIPQELLDFVDIFSPNESELGRLTGLSTESFEEITQAAAKCHKLGVKQVLVKLGAKGSALFIEGEEPIQQPAIFAKTVIDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAASLCVQVKGAIPSMPDRKSVLELLNHH* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1702 368 Hamap Ribokinase [rbsK]. 61 363 IPR011877 GO:0004747|GO:0006014
Mal4g1702 368 PANTHER SUGAR KINASE 61 368 - -
Mal4g1702 368 CDD ribokinase 67 357 IPR011877 GO:0004747|GO:0006014
Mal4g1702 368 Gene3D - 60 367 IPR029056 -
Mal4g1702 368 MobiDBLite consensus disorder prediction 1 20 - -
Mal4g1702 368 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 309 322 IPR002173 GO:0016773
Mal4g1702 368 SUPERFAMILY Ribokinase-like 62 365 IPR029056 -
Mal4g1702 368 Pfam pfkB family carbohydrate kinase 63 357 IPR011611 -
Mal4g1702 368 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 97 121 IPR002173 GO:0016773
Mal4g1702 368 PRINTS Ribokinase signature 234 249 IPR002139 GO:0016301
Mal4g1702 368 PRINTS Ribokinase signature 92 111 IPR002139 GO:0016301
Mal4g1702 368 PRINTS Ribokinase signature 164 177 IPR002139 GO:0016301
Mal4g1702 368 PRINTS Ribokinase signature 65 86 IPR002139 GO:0016301
Mal4g1702 368 PRINTS Ribokinase signature 278 289 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1702 Mal-Chr4 29958480 29961572 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1702 K00852 - gmx:102666284 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1702 4 29958480 29961572 Mal4g1702 4 29958480 29961572 ECH