Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1519 ATGAACACAAACACAACAATGGGATCATCATTCAATCCCATCTCATGCAACAGAAAAACACATTATAGATTAGAAACTAAAAATGTATCATACAAATTGTGCAGCCAACTTGATGAACTTAGAACCCTTTGTTTCGGTTCGAATCCTAGGAGAGGTTCAAAGTTCATTTTGAAGGATGTAAATTGTGAGGCAAGGCCAGGGGAGGTAACCGCTATTGCTGGTCCTAGTGGAGCTGGAAAAACAACACTGCTTGAAATTCTTGCCGGGAGAATACCCTCATGTAAAGTTTCTGGACAAGTACTTGTCAATCAGAAGCCTATGGATGTGAACAGATTCAGAAGAGAATCAGGGCATGTAACACAAGAAGACGCTTTGTTTCCATCTCTTACAGTTCGAGAGACACTCATGTATAGCGCTTTGTTGAGGCTTCCCGGTGGGTGTAAAGTGGCTGCCATGAGAGTCGCAGAGTTGATGAAGGAACTGGGGTTGGATCCAATTGCAAATTCAAGAATTGGCAATGGATCAGACCATGGTATATCAGGCGGGGAAAGGCGTAGAGTTTCCATTGGTGTTGACTTGGTTCATGACCCTGCAATTATTTTGATTGATGAACCAACTTCAGGTTTGGATTCAGTATCAGCTCTTAATGTAATATCATTGCTTAGACTAATGGCCTTTAACCAAGGTAAGACAGTTGTTTTAACTATCCACCAACCCGGTTTCCGAATCTTAGAGCTACTTGATAGCCTCATTTTGCTATCTGATGGATTTGTCATGCATAATGGTTCATTGAATCTTCTAGAGGCAAGGCTCACTTTATCCGGTCATCGCATTCCCAACCATGTCAATGTCCTAGAATTTGCTCTTGATGTCATGCAAAGCTTGGTTATACATACTTCAGAATCTGTGAACAATCAATTTCTTCTCAATGATGACAAAGAGCACCAAGATCACAAGATGATGATGCAGTGCTCTATGATTGTCAAAGAAAAGGCAATATCGTACTCAAATTCTCCAATGGAGGAGATTTTAATCCTAGGACAGAGATTTTGCAGCAACATATTCAGAACCAAGCAACTCTTTGTTACAAGGGTCATACAGGCCTTAGTAGCTGGATTTATATTGGGGACCATATTCTTGAATGTTGGCAACAAACAAAGTAAAGTAGCGTTACAAACAAGAAGCGGCTTCTTCGCTTTTAGCCTTACCTTTTTGTTATCATCAACAACAGAAGGGCTGCCTATTTTCTTGGAGGAGAGAAGAACTTTTATGAGAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTTTAGCAAATACACTTGTGTTTCTTCCTTTTCTTTTAATGGTTGGTCTTCTGTATACTACTCCAGTTTATTGGCTGGTAGGATTAAGGAAAGACATTGATGGTTTCCTTTACTTCTCCTTAGTGGTTTGGTTGGTCCTATTAATGTCGAATTCTCTTGTGGCTTGTTTCAGCGCCCTAGTTCCGAATTTCATCCTCGGAAGCTCGGTGATTGCCGGTCTAATGGGGTCTTTCTTTCTATTCTCAGGGTATTTCATATCAAAGGAGAAAATACCTAGTTACTGGATTTTTATGCACTATATAAGCCTATTCAAGTATCCATTTGAGTGCCTTATGATAAATGAGTATGGAGGTGAGCAAGGGAAAAGGAGATGCATAGAAGTTAATAATGAGGAATGCATTTTGTATGGAGTTGAGTTCTTAAGACAACAGGGTCTCAAAGAGACACACAAATGGACCAATTTGGCTGTAATGTTCAGCTTCATAATAGGGTATAGAGTGCTTAACTTTATAATTCTTTGGTCTAGATGTTACAAAAGCAGAAAATAA 1860 0.3968 MNTNTTMGSSFNPISCNRKTHYRLETKNVSYKLCSQLDELRTLCFGSNPRRGSKFILKDVNCEARPGEVTAIAGPSGAGKTTLLEILAGRIPSCKVSGQVLVNQKPMDVNRFRRESGHVTQEDALFPSLTVRETLMYSALLRLPGGCKVAAMRVAELMKELGLDPIANSRIGNGSDHGISGGERRRVSIGVDLVHDPAIILIDEPTSGLDSVSALNVISLLRLMAFNQGKTVVLTIHQPGFRILELLDSLILLSDGFVMHNGSLNLLEARLTLSGHRIPNHVNVLEFALDVMQSLVIHTSESVNNQFLLNDDKEHQDHKMMMQCSMIVKEKAISYSNSPMEEILILGQRFCSNIFRTKQLFVTRVIQALVAGFILGTIFLNVGNKQSKVALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTFMRETSRGAYRVSSYVLANTLVFLPFLLMVGLLYTTPVYWLVGLRKDIDGFLYFSLVVWLVLLMSNSLVACFSALVPNFILGSSVIAGLMGSFFLFSGYFISKEKIPSYWIFMHYISLFKYPFECLMINEYGGEQGKRRCIEVNNEECILYGVEFLRQQGLKETHKWTNLAVMFSFIIGYRVLNFIILWSRCYKSRK* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1519 619 Pfam ABC-2 type transporter 342 553 IPR013525 GO:0016020|GO:0140359
Mal4g1519 619 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 51 267 IPR027417 -
Mal4g1519 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 12 611 - -
Mal4g1519 619 SMART AAA_5 66 257 IPR003593 -
Mal4g1519 619 Gene3D - 39 276 IPR027417 -
Mal4g1519 619 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 24 280 IPR003439 GO:0005524
Mal4g1519 619 Pfam ABC transporter 57 207 IPR003439 GO:0005524
Mal4g1519 619 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 611 - -
Mal4g1519 619 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1519 Mal-Chr4 23660379 23662238 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1519 17 267 Calmodulin-binding Proteins AT2G36910 29.070 4.77e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1519 K05681 - gmx:100776372 1041.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1519 4 23660379 23662238 Mal4g1519 4 23660379 23662238 ECH