Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1502 ATGTCTCTCTTTTTCACTTCCCCTCCTCGTCCACGTCATCGTCCTCGTTCTCGTTCTCGTTCACTTTCCAACCACACACTCTTCCTCTGCCTCTTCCTCTCCATAGCCACAATCCTCTCCCCTCACGCCCACGCGCGTTTCATCTCACGCGATCTAATCTCCGATGGCTCCAACGTTCTTCGTCTCCCTACAGAACCTGAATCCACCTGCGAACAGACCTATGGTTTCTTACCGTGCACCACCACTGTTCTTGGAAACTTGTTCCTTATCTTAGTCTATGGATTTCTTATGTACACTGCTGCTACGTTTTTGTCTAATGGTAGTGAGCTTTTGCTTGAGATCTTGGGTCCTGGCATTGTTGGTGGCTTGTTTCTTCCTATTCTTGGTGCTCTTCCTGATGCCATGCTCATTCTCGTGTCTGGGCTTTCAGGAAGTCCAGAAGTTGCTCAAAGTCAGGTATCTGTTGGAATGGGACTGCTAGCTGGATCAACAGTGCTGCTTCTGACTATAATATGGGGGACTTGTGTAATTGTTGGCAAGTGTGACATTGAGGATTCAATTGCATTAGATTCAACAGACACTAGGGGGTTCCATTTAACTGGTTCTGGTGTTAGCACTGATATTTGGACAAGTTATGCTGCAAGGATTATGGTTATATCTGTCATTCCATTTTTGATCGTTCAATTACCACAGATTCTCCATTCAACTTCTGGAAGGCACTTGGCTGTTTTGATTGGTTTTATTGTCTCTGCCTGTTTATTGATCTCTTATTGCCTTTACCAGATTTTCCAGCCCTGGATACAAAGGAGAAAATTGGAATATATTAAACACAAGCATGTTATTGTGGGACTTTTGAGACATTTGAAGATGCGTTCGTTGGGAAGGCTGCTGAAAGATGATGGGGAACCAGATAAAGAAGTAATTAGAAAGTTGTTTACAACAATTGATGAAAATAAAGATGGACATCTTACTCATGGTGAAATGACAGCGCTGGTAGTTGGAATTCAATTTGAGGAGCTTGACCTTGATCACAATGACGCTGTGACAAAAATAATGGCGGATTTTGATACTTCTCGTAATCAACATATTGACGAACAAGAGTTTGTTAATGGAGTCTGTAGATGGCTTCAAACGGCCAGGGGTTCTCGGGTTGCATCTGGTGATGCTGGTCCACACACTGTGAAGTTTTTAAGTGATTTTCACACGGAAACAAAGAGGGAACATGATCTTCTGGATGTAGGGGGTCATAGTGATGAAGGTGCTGAAGGTGTGGAGAATGCTAGATGGATTTCCATCAAAGCAGGACTGTTCCTGTTACTCGGTTCTCTTATCGCTGCTGCATTTGCTGATCCTCTGGTTGATGTGGTCGATAACTTTTCTGATGCTACAAATATTCCAGCTTTCTTCATTTCCTTCATTTTTCTACCTCTAGCAACCAATTCAAGTGAAGCAGTATCAGCAATAATTTTCGCTAGTCGTGATAAGAGGCAAACAGCGTCATTAACATTTTCTGAGATTTATGGTGCAGTGACAATGAACAATGTGCTGTGTCTATCGGTCTTCTTGGCACTCGTATATGTGAGGGGATTGACATGGGATTTCTCTTCTGAAGTGTTGGTTATTCTCATCGTTTGCATTATCATGGGTGCCTTTGCCAGTTTCCGCACCGTTTTCCCTATATGGACATCTATAGTGGCTATCCTACTCTATCCTTTCTCCCTGGCATTGGTCTATGTTCTTGATTATCAATTTGGGTGGTCATAG 1764 0.4297 MSLFFTSPPRPRHRPRSRSRSLSNHTLFLCLFLSIATILSPHAHARFISRDLISDGSNVLRLPTEPESTCEQTYGFLPCTTTVLGNLFLILVYGFLMYTAATFLSNGSELLLEILGPGIVGGLFLPILGALPDAMLILVSGLSGSPEVAQSQVSVGMGLLAGSTVLLLTIIWGTCVIVGKCDIEDSIALDSTDTRGFHLTGSGVSTDIWTSYAARIMVISVIPFLIVQLPQILHSTSGRHLAVLIGFIVSACLLISYCLYQIFQPWIQRRKLEYIKHKHVIVGLLRHLKMRSLGRLLKDDGEPDKEVIRKLFTTIDENKDGHLTHGEMTALVVGIQFEELDLDHNDAVTKIMADFDTSRNQHIDEQEFVNGVCRWLQTARGSRVASGDAGPHTVKFLSDFHTETKREHDLLDVGGHSDEGAEGVENARWISIKAGLFLLLGSLIAAAFADPLVDVVDNFSDATNIPAFFISFIFLPLATNSSEAVSAIIFASRDKRQTASLTFSEIYGAVTMNNVLCLSVFLALVYVRGLTWDFSSEVLVILIVCIIMGAFASFRTVFPIWTSIVAILLYPFSLALVYVLDYQFGWS* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1502 587 ProSitePatterns EF-hand calcium-binding domain. 356 368 IPR018247 -
Mal4g1502 587 Pfam Sodium/calcium exchanger protein 436 578 IPR004837 GO:0016021|GO:0055085
Mal4g1502 587 Pfam Sodium/calcium exchanger protein 88 264 IPR004837 GO:0016021|GO:0055085
Mal4g1502 587 ProSitePatterns EF-hand calcium-binding domain. 316 328 IPR018247 -
Mal4g1502 587 ProSiteProfiles EF-hand calcium-binding domain profile. 303 338 IPR002048 GO:0005509
Mal4g1502 587 PANTHER SODIUM/CALCIUM EXCHANGER NCL 40 584 - -
Mal4g1502 587 CDD EFh 308 372 IPR002048 GO:0005509
Mal4g1502 587 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 40 584 IPR004713 GO:0006812|GO:0008324|GO:0016021
Mal4g1502 587 SUPERFAMILY EF-hand 302 376 IPR011992 -
Mal4g1502 587 Gene3D - 423 581 IPR044880 -
Mal4g1502 587 Gene3D - 260 384 - -
Mal4g1502 587 Pfam EF-hand domain pair 306 370 IPR002048 GO:0005509
Mal4g1502 587 SMART efh_1 307 335 IPR002048 GO:0005509
Mal4g1502 587 SMART efh_1 347 375 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1502 Mal-Chr4 23153573 23157962 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1502 43 587 EF-hand Containing Proteins AT1G53210 67.019 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1502 - - gmx:100809896 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1502 4 23153573 23157962 Mal4g1502 4 23153573 23157962 ECH