Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1495 ATGAGAAAAATTACAAAAGCACTATGCTTCATTCTCTTCTTTTCCATAGTATCACTTCAAGTTCAATGCCGTTTTCTTCCCAATAAATTAATTTCCAATGGAGTTGATGATGTTCAATTAGAAGAAGAATCTTATCTACTTCTTAATAATGATAATGACAAAGGTGTTATTATTGAATCTTCTTCTAATCCAGGGGAGTATTGTAAGCAAATGTATGGTTTTTTGCCATGTTCTAATAACATTCTTGGTCATTTATTTCTGATTTTGGTTTATGAGTACTTATTGTTCCATGGAGAATCCTATTTGGCTGCTGGAGGTGAACAAATCTTCAAGATTCTTGGTCCAGGTGTTTTTGGTGCTAGTGCTTTTGATATTCTTGGTGCTCTTCCAGAGTCCTTAATTCTTCTTGTTACTGGACTTTCAGGTGATAAGGAGAGTGCACAAGAGTATGCTGCCACTGGTGTTGGTTTGTTAGCTGGATCATCCATCTTGCTTCTCACAGTTGTGTGGGGGATTTGTGTTACTGTTGGCAAGAAAAGCTTCAAAAAGGACTCTCATTCTTCTGATACCTCATATTCATCAACAGAAAGAATAAAACAAGCTTTGATTGGTGATGGCATTACTATGGATGGAGACACAAGAAAGATGGCTAGAAATATGGTTTTCTCTGTTATACCACTCCTCATAATGCAGATTCCCACATTATTTGATTTCTCTTCAACATTACGTAATGTAACCTTGATGATTTCTCTCATCATTTCTGTCACTTTTCTCATCTTATACTTCTTTTACCAGCTATTTAAACCTCAAATAGAGAAAACAAGACTAGAATACATAAAGCATGACGATTTAATATTAAGAATTTTCCAACATGTTGAAAAGCAAACTCTGCAGAAGATCCTAGCTGAGGATGGAACTCCAAATGTAGCTGCTATAAGTGGGCTATACAATGAATTCAATCAACATGGGAGAGAACACTTATTAACTTCTGATGTAAGAGAGATGTTGGTTGGGAACAATTTAACCAACACAAATATCAGAGAGGACCAAATAACAAACTTGTTAAAAGTTTTTGACAAAAATGGTGACAAAATTATAACTGAGGAAGAATTTGTTAGTGGCTTAACAGAATACTTAAACCAAGCAAATCATGCTTTGGATAGAAAGTACCTTCCCAAAGAAAATATGAACAAAATGTACCAGACTTTTATCAAGCCATGGATTGAACACACGAAAAAACAACGCGAATTAAAGGGACATCTTTTAGCTGGAGTCTTAAATCATGCTCATAGTGAGATTGTTGGTAGGTTGCTCAAAGATGACGGTACACCTGATAAAGATGCTATCAAAAGGTTCTTTAAGGAAATTGATAGCGATAAAGATGACAGTATTTCGAGATCTGAGTTAGAAAATGTAGTGAAGGAGATTCAGTTTGGTAAGGCTGTAGATGCAGAGGAAGCAGTCACAAAATTCCTTCAAGTTCTTGATGTCAACAGAGACAATGAAATTAGTAATGGAAGAGAATCAATCCAAAGGGGTGACTGCATGGTTAGAAGCTATAGCATATGTTGTGTTGGGAATTACTATGTTGTCACTTCTTGCTGA 1605 0.3558 MRKITKALCFILFFSIVSLQVQCRFLPNKLISNGVDDVQLEEESYLLLNNDNDKGVIIESSSNPGEYCKQMYGFLPCSNNILGHLFLILVYEYLLFHGESYLAAGGEQIFKILGPGVFGASAFDILGALPESLILLVTGLSGDKESAQEYAATGVGLLAGSSILLLTVVWGICVTVGKKSFKKDSHSSDTSYSSTERIKQALIGDGITMDGDTRKMARNMVFSVIPLLIMQIPTLFDFSSTLRNVTLMISLIISVTFLILYFFYQLFKPQIEKTRLEYIKHDDLILRIFQHVEKQTLQKILAEDGTPNVAAISGLYNEFNQHGREHLLTSDVREMLVGNNLTNTNIREDQITNLLKVFDKNGDKIITEEEFVSGLTEYLNQANHALDRKYLPKENMNKMYQTFIKPWIEHTKKQRELKGHLLAGVLNHAHSEIVGRLLKDDGTPDKDAIKRFFKEIDSDKDDSISRSELENVVKEIQFGKAVDAEEAVTKFLQVLDVNRDNEISNGRESIQRGDCMVRSYSICCVGNYYVVTSC* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1495 534 Gene3D - 273 409 - -
Mal4g1495 534 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 9 393 - -
Mal4g1495 534 ProSiteProfiles EF-hand calcium-binding domain profile. 444 479 IPR002048 GO:0005509
Mal4g1495 534 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 9 393 - -
Mal4g1495 534 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 399 504 - -
Mal4g1495 534 SMART efh_1 350 378 IPR002048 GO:0005509
Mal4g1495 534 SMART efh_1 448 476 IPR002048 GO:0005509
Mal4g1495 534 SUPERFAMILY EF-hand 342 504 IPR011992 -
Mal4g1495 534 ProSitePatterns EF-hand calcium-binding domain. 457 469 IPR018247 -
Mal4g1495 534 ProSiteProfiles EF-hand calcium-binding domain profile. 346 381 IPR002048 GO:0005509
Mal4g1495 534 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 399 504 - -
Mal4g1495 534 Gene3D - 426 507 - -
Mal4g1495 534 Pfam Sodium/calcium exchanger protein 100 267 IPR004837 GO:0016021|GO:0055085
Mal4g1495 534 ProSitePatterns EF-hand calcium-binding domain. 359 371 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1495 Mal-Chr4 22956907 22992186 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1495 399 513 EF-hand Containing Proteins AT1G53210 33.621 7.34e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1495 - - gmx:100799062 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1495 4 22956907 22992186 Mal4g1495 4 22956907 22992186 ECH