Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1425 ATGGAGGTTGAGCAAGAGAATCTCCAAATTCCCGAAACCATTGTCTACACAACCCTCACTCCCCTTCCTCTCACCGCCGATGATTCCCCAGATTCCGATAACCACGAACAATACTCCGTTTTCCGCAACGAAATTTCTCTTAACACCCCCCAAATCAATTCAGTTTCTTCCACTGCCATAGATTTCTTCTCCCTCGATGTCGCCGATGAAGAACCCGAAGCTGTAACCCCCCTCCCGGAGCCTCTCACGCCGGCTGAGGCGAAAACGGAGGGTATTGCACCCGAGGTGAAGCTAGAGAATGGTTGGTTTCGTGGGAATTGTAAATTCAAAAGCCCTATGCTTCAGCTTCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCACCTACTCCAGAAGAGAAAGCTAAACGTGATGCAGCAATAGAATCTGTTTTTAAAGTTATTAAAAATATATGGCCTCATTGCCAGGTTGAAGTTTTTGGGTCTTTCAGGACAGGGTTGTATCTGCCAACTAGTGATATTGATGTTGTGATTTTGAAATCAGGCTTACCAAAACCGCAGATGGGTTTGAATGCAATTTCTAGATTATTGTCACAAAAGAGCATGGCTAAAAAGATACAGGTCATTGGAAAGGCTCGCGTGCCAATTGTTAAATTCGTTGAAAACAAGAGTGGTCTTTCCTTTGATATAAGTTTTGACATAGAGAATGGACCAAAGGCTGCCGAGTATATTCAGGAAGCAGTGACTAAGTGGCCACAATTACGGCCATTGTGTTTGATTTTGAAAGTATTTTTACAACAAAGAGAACTTAATGAGGTATATTCTGGTGGTATTGGTTCTTATGCTCTCCTTACCATGCTGATGGCAATGTTGCGGAATGTCCGCCAGAGCCAAGCTTCTGCAGAGCACAACTTAGGGGTCCTTTTGGTACATTTTTTCGATATTTATGGACGTAAATTGAATACCTCAGATGTTGGTGTAGATTGTAATGGAGAAGGCACCTTTTTCCAAAAGAGTAGTCGAGGGTTTTATAACAAAGCACGACCATTGCTTCTCGGAATTCAGGATCCACAGACGCCAGATAATGACATTGGGAAGAATTCCTTCAATTACTTCCAGGTTAGGTCAGCGTTTTTAATGGCTTACTCAACTTTAACAAATCCCAAGGTCATCCTGAGCTTAGGACCTAACAGGAGCATTCTTGGCACTATAATTAGACCAGACCCCGTCTTGATGGAGCGCAAAGGGGGGTCGAACGGAGAGATGACTTTTAATAGTTTACTCCCTGGTGCTGGTGAGCCAGTACAACAGCAGTACGGAGAGCATGATATGTTATGCAATTGGCAGTTAGATTTTGAAGAAGAACCACTACCACGCGGAGATGGAGATAACACCCGTGCAGAGCCCAGCTCTGGCTCTTCCAGGAAAAAGGGAAAATCTGCATCGAAGGAGAATAAGGAAAATGGCTGTGCAGAGCCCAGCCCACGATCTTCCAGGAAAAAGAGAAAATCTGCATCGAAGGAGAATAAAGAAAATGGCTCTATGACAGATAACGGGGTACATAAGAAGCATAAGAAAAAACGGGTTAAACAGTTTAGGTCAGAGGCTAGTTGCTGA 1617 0.4354 MEVEQENLQIPETIVYTTLTPLPLTADDSPDSDNHEQYSVFRNEISLNTPQINSVSSTAIDFFSLDVADEEPEAVTPLPEPLTPAEAKTEGIAPEVKLENGWFRGNCKFKSPMLQLHKEIVDFCEFLSPTPEEKAKRDAAIESVFKVIKNIWPHCQVEVFGSFRTGLYLPTSDIDVVILKSGLPKPQMGLNAISRLLSQKSMAKKIQVIGKARVPIVKFVENKSGLSFDISFDIENGPKAAEYIQEAVTKWPQLRPLCLILKVFLQQRELNEVYSGGIGSYALLTMLMAMLRNVRQSQASAEHNLGVLLVHFFDIYGRKLNTSDVGVDCNGEGTFFQKSSRGFYNKARPLLLGIQDPQTPDNDIGKNSFNYFQVRSAFLMAYSTLTNPKVILSLGPNRSILGTIIRPDPVLMERKGGSNGEMTFNSLLPGAGEPVQQQYGEHDMLCNWQLDFEEEPLPRGDGDNTRAEPSSGSSRKKGKSASKENKENGCAEPSPRSSRKKRKSASKENKENGSMTDNGVHKKHKKKRVKQFRSEASC* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1425 538 Pfam Cid1 family poly A polymerase 304 362 IPR002058 -
Mal4g1425 538 CDD NT_PAP_TUTase 136 246 - -
Mal4g1425 538 SUPERFAMILY PAP/OAS1 substrate-binding domain 252 391 - -
Mal4g1425 538 MobiDBLite consensus disorder prediction 470 519 - -
Mal4g1425 538 Gene3D - 111 387 - -
Mal4g1425 538 PANTHER INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATED 102 528 - -
Mal4g1425 538 Gene3D Beta Polymerase, domain 2 129 237 IPR043519 -
Mal4g1425 538 Pfam Nucleotidyltransferase domain 143 244 IPR002934 GO:0016779
Mal4g1425 538 PANTHER POLY(A) RNA POLYMERASE 102 528 IPR045862 GO:0004652|GO:0031499|GO:0043631
Mal4g1425 538 MobiDBLite consensus disorder prediction 454 538 - -
Mal4g1425 538 SUPERFAMILY Nucleotidyltransferase 112 264 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1425 K03514 - gmx:100811320 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1425 4 21300180 21306058 Mal4g1425 4 21300180 21306058 ECH