Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1322 ATGGATTACCGCATCTGTTTCATTCTTCTTTTCTGTGTCTCAATTTTCCCATCTTCTTCTTCTTCCTCACCAACGAGTCAAATAAACTCAAACTCAGTCCTAGTAGCACTTCTCGACTCACATTACACTGAACTCACCTACCTCATAGAAAAAGCAATGCTCTTACAAACACTTGAAAACACCGTCGCAAAACACAACATCACAATCTTCGCTCCAAACAACGAAGCCCTCGAACGTAATCTCGACCCGAATTTCAAACAGTTTCTTCTCCAACCCGGTAATATCCATTCCCTCCAAACCCTCCTTCTTTCCCACGTCATCCCAACCCGAATTCAAACCGGGTCAACCCGTTTCAAAACTATCTCCGATTATCACCTCCATCTCGAAACAAATACCACCACCGGAGAATGCACGGTTAACCAAGTCAAACTCACCCACCCGAATATTATTACCCGACCCGACGGTGTCATTCATGGAATCCAGAAACTTCTCATCCCACGCGCCGTTGAAGATGAATTCAACAACCGCCGTAGTCTCAGTTCAATCACCGCCGTAAAACCAGAAGGAGCACCAGATGCTGACACTAGAAGGTTAAAAAAATCTCCGCCACCAGAAAAACAAGGTTCACCACCGGAGATTCCGATCTACGAAGCTTTGGCTCCGGGACCATCACTAGCTCCGGCACCGGCGCCGGGACCAGGAGGACCACACCACCACTTCAACGGAGAATTACAAGTGAAGGATTTCATCAAAACGTTACTGCATTACGGCGGTTACAACGAAATGGCGGATATACTCGTAAACCTAACGTCTTTAGCGACGGAGATGAGCCGTTTAGTTTCAGAGGGTTATGTTTTAACGGTTTTGGCGCCGAACGACGAAGCGATGGCGAAGTTAACGACGGAGGAGTTAAGTGAACCGGGTTCACCGGAGGAGATAATGTATTACCATATTATCCCTGAGTATCAAACGGAAGAGAGTATGTATAATGCTGTTAGGAGATTTGGGAAGGTGAGTTATGATACGTTGAGGGTGAAGGATAAGGTTGTGGCAATGGAAGCTGATGGGTCGGTTAAATTTGGGAGTGGAGATGGGTCGGGTTATTTGTTTGACCCGGATATTTATACCGATGGGAGGATTTCTGTTCAGGGGATTGATGGGGTTTTGTTTCCTGTGGTGGAGGAGGAGAAGGTTGTGGAGCGGGTTAAATCCGTTTCGACGATGGGTCAACCCGGGAAAGTTGTTAAACAGAGGAGAGGGCAACTACTGGAAACAGCATGCTGGATGCTTGGAACCGTCGGACAACATTCTAGATTTACCTGTTGTCAATGA 1332 0.4677 MDYRICFILLFCVSIFPSSSSSSPTSQINSNSVLVALLDSHYTELTYLIEKAMLLQTLENTVAKHNITIFAPNNEALERNLDPNFKQFLLQPGNIHSLQTLLLSHVIPTRIQTGSTRFKTISDYHLHLETNTTTGECTVNQVKLTHPNIITRPDGVIHGIQKLLIPRAVEDEFNNRRSLSSITAVKPEGAPDADTRRLKKSPPPEKQGSPPEIPIYEALAPGPSLAPAPAPGPGGPHHHFNGELQVKDFIKTLLHYGGYNEMADILVNLTSLATEMSRLVSEGYVLTVLAPNDEAMAKLTTEELSEPGSPEEIMYYHIIPEYQTEESMYNAVRRFGKVSYDTLRVKDKVVAMEADGSVKFGSGDGSGYLFDPDIYTDGRISVQGIDGVLFPVVEEEKVVERVKSVSTMGQPGKVVKQRRGQLLETACWMLGTVGQHSRFTCCQ* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1322 443 Gene3D FAS1 domain 33 167 IPR036378 -
Mal4g1322 443 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 7 443 - -
Mal4g1322 443 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 7 443 IPR044654 -
Mal4g1322 443 SUPERFAMILY FAS1 domain 225 391 IPR036378 -
Mal4g1322 443 SUPERFAMILY FAS1 domain 31 166 IPR036378 -
Mal4g1322 443 Pfam Fasciclin domain 269 360 IPR000782 -
Mal4g1322 443 Pfam Fasciclin domain 41 166 IPR000782 -
Mal4g1322 443 ProSiteProfiles FAS1/BIgH3 domain profile. 29 164 IPR000782 -
Mal4g1322 443 Gene3D FAS1 domain 243 391 IPR036378 -
Mal4g1322 443 SMART fasc_3 68 167 IPR000782 -
Mal4g1322 443 SMART fasc_3 287 392 IPR000782 -
Mal4g1322 443 MobiDBLite consensus disorder prediction 186 240 - -
Mal4g1322 443 ProSiteProfiles FAS1/BIgH3 domain profile. 246 374 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1322 Mal-Chr4 19188922 19191081 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1322 - - gmx:100782264 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1322 4 19188922 19191081 Mal7g1761 7 61736756 61739902 PCT