Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1316 ATGGCGGAATTCGTGAGCCCTAATCCAACAACGGCTCACAAAAAGCGCCTTCCTACTCCAGCAACAAATTTCTTCGTCGGCTCCAACGACGACCAACTCGAACGCGCCGCTGCTCGTGCTGCACGCGCCGCCGCCATCCGCCGCACTTTTAACGTGCAATCTCAACCCTCCGATTCTGATCCTTGTCTCAATAGGCAACAGATTCTTGAGTTGTTTCATAATTGCATTAAGCTTGCTTCAGAAAATAAAATTAATCAGAAAAATACATGGGATTTGGATTTGATTGATCATCTTACTGATATTATTAGGGCTGAAGATGATAATGATACGGAGACTAATTTTCAAATGGCAAGCTGCACTCTTGAAGCTGGAGTCAAAATTTATTCATTAAGGGTGGATTCGGTGTATTCTGAGGCATATAAAGTCCTTGCTAGAATGAGTAGAGTAGGCCAAGAAACTGAACAAGAGACTACTCTAGAGAGTGTTAAGGTTGAAGGTGGACGAGAAGATACCAAGAAGGGAATCAAAGAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTTGAGGCTCTTAATGTAAAGAAGTTTGATGTTGCGTTTGCTGTGGACCCCCTCTATCGTCAAACATCAGCAAAATTTGATGAAGGGGGAGCCAAAGGTCTTTTGCTGAATAACCTCGGTGTACATGGTCGATGTAGGGTGCTATTTGATTCACAAGATGTGCCAGGGAAGTATGCAGCTAGTCAAAATGAACATGATATTTCAGATACAATTGATCTTTCGTTTGCAAGAGATTGTGTTGAACAGATGTTATCGGACGTGCATATTAAGGACAATATTTCTCCAACTCTCATGGTGATGGTAAATCAATTAGATGAAAATAATAGAAGGCCCTCTGATTTTCAATCTTATGGCCAGAAATCAGCAGAAGAGTTTGATCCAGCTATTGATGGTGAAGTTGGGGATGAAACAGAAGAGTATGAGAACTTCCCAACTTGGCCCCATGAGCATGACAACCAAACGTTTGTTGCTGAAGTAGGCCCTAATGATGCAGACCCAAATTTTACAAGTTATCCTCAGGAGGAAGAACCTTTTCCTTCCCAAGACCCTGAAATGGACCAAATATTTGGAAATGTTGATGAGTATCTATCTTTAAGTTTGGGTTTTAGGTCAAAGAAAAATGCGTGGGCTGGTCCTGATCATTGGCAGTACCGAAAAACTAAAGGTTCAGAGTCAGAAGTTCATTGTTCTTCTGAAGGTGGATCAACCCTCAAAACTAGGCAGCCAAGGACTATGAGACAGATCGAAGTTGATTTAGATTTCACAAATTTTCTTGGGAAAACACTTCCAGATATCTTTGCTCCTCCCAAGAATCCCAAATCGTTATTACTCCCTGAAAATAGACCTCATTGTGTTACAAAACTCCCAGAGGACTGCCACTATGAGCCAGAGAATCTCGTCAAGTTATTTCTTTTGCCTAATGTAAAGTGTCTGGGGAGGAGGGCGAGAAAGTTCTCAGGTGTATATACCGATGGATTGACAGAGCAATGCAACAACAATGAACCATTCAATTCATGGGATGATGGAAGTGTTTGTGATGGAGAGTATGATGGTGCACATAGTGATATGGATGACTCAAGCACACTTGTTTCTCAGCCTCGTCAGATCAACCGAATGGAAGTTCAATATGACAAAACGTCCAAGCAAGTAGACGTTCAGGCACTGAAACTTACTCTTTGGAACCATATTCAAGAATCCGTTAAACTTCCTTTTCAGGGTGAGAGAGAAATGATATCTTTCAGAGATATATTGGCCATCTTTCCAAGTGAATGCAATGCTGCTGCAACTGTTACTGACATATCTCCACATTTGTGTTTCATATGCCTATTGCATTTGGCTACTGAGAAAGAGTTGAGCATCCAAAGCTGTCCCAACTTGGATGATCTTCACATACATATGCCTGCCTGA 1971 0.4155 MAEFVSPNPTTAHKKRLPTPATNFFVGSNDDQLERAAARAARAAAIRRTFNVQSQPSDSDPCLNRQQILELFHNCIKLASENKINQKNTWDLDLIDHLTDIIRAEDDNDTETNFQMASCTLEAGVKIYSLRVDSVYSEAYKVLARMSRVGQETEQETTLESVKVEGGREDTKKGIKEKLSPLSTLESSFEALNVKKFDVAFAVDPLYRQTSAKFDEGGAKGLLLNNLGVHGRCRVLFDSQDVPGKYAASQNEHDISDTIDLSFARDCVEQMLSDVHIKDNISPTLMVMVNQLDENNRRPSDFQSYGQKSAEEFDPAIDGEVGDETEEYENFPTWPHEHDNQTFVAEVGPNDADPNFTSYPQEEEPFPSQDPEMDQIFGNVDEYLSLSLGFRSKKNAWAGPDHWQYRKTKGSESEVHCSSEGGSTLKTRQPRTMRQIEVDLDFTNFLGKTLPDIFAPPKNPKSLLLPENRPHCVTKLPEDCHYEPENLVKLFLLPNVKCLGRRARKFSGVYTDGLTEQCNNNEPFNSWDDGSVCDGEYDGAHSDMDDSSTLVSQPRQINRMEVQYDKTSKQVDVQALKLTLWNHIQESVKLPFQGEREMISFRDILAIFPSECNAAATVTDISPHLCFICLLHLATEKELSIQSCPNLDDLHIHMPA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1316 656 PIRSF Condensin_H 3 548 IPR022816 GO:0000796|GO:0007076
Mal4g1316 656 PIRSF Condensin_H 538 656 IPR022816 GO:0000796|GO:0007076
Mal4g1316 656 Pfam Condensin complex subunit 2 29 545 IPR022816 GO:0000796|GO:0007076
Mal4g1316 656 Pfam Condensin complex subunit 2 541 653 IPR022816 GO:0000796|GO:0007076
Mal4g1316 656 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 656 IPR022816 GO:0000796|GO:0007076
Mal4g1316 656 PANTHER CONDENSIN COMPLEX SUBUNIT 2 1 656 - -
Mal4g1316 656 MobiDBLite consensus disorder prediction 409 429 - -
Mal4g1316 656 MobiDBLite consensus disorder prediction 415 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1316 Mal-Chr4 19130657 19135942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1316 K06676 - gmx:100777082 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1316 4 19130657 19135942 Mal4g1316 4 19130657 19135942 ECH
Mal4g1316 4 19130657 19135942 Mal7g1758 7 61656673 61661252 PCT