Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1291 ATGGCTTCACTAAAGCAAAACGGCGCTGAAGAACCACTTTTGTTCACCCACAGCGATGCACCGTCGGTAAAACATCATGAATCTGACGGCGAGCTTGAGAGGATACTATCAGACACCACCGTGCCATACTTCAGCCGTGTCGGCTCCGCCACGTGGATTGAGCTCAAACTCCTTTTCTTCTTAGCTGCACCTGCTGTCTTTGTTTATCTCATTAATTATGTCATGTCTATGTCCACACAAATCTTCTCCGGCCACCTTGGTAACCTCGAGCTCGCTGCGGCGTCTCTCGGCAACACCGGGATTCAAATCTTTGCTTATGGTCTCATGTTGGGTATGGGGAGTGCAGTTGAAACACTATGTGGACAAGCATTTGGAGCAGAAAAGTATGACATGCTTGGAATATATTTACAAAGATCAACAATTCTTCTAACAATAACCGGATTTTTTCTGGCAATCATTTACATATTAAGCGAACCAATCTTAATATTTATCGGACAATCACCAAGAATCGCTTCTGCAGCAGCACTTTTTGTCTATGGACTTATCCCACAAATATTTGCTTATGCAGTAAATTTTCCAATCCAAAAATTTCTTCAAGCACAAAGTATAGTTCTACCAAGTGCTTATATTTCAGCAGCAACTTTAGTTGTTCATTTAATATTGAGTTGGCTTGTTGTGTTTAAGATTGGTTTGGGCTTATTGGGTGCTTCATTGTGTTTGAGTTTGTCTTGGTGGATTATTGTTGTTGCACAATTTGTTTATATTTTGAAGAGTGAAAAATGTAAGCGGACTTGGAATGGGTTTACTTTGGAGGCGTTTTCGGGGTTGCCGGAGTTTTTTAAGCTATCGGCGGCGTCGGCGGTAATGTTGTGTCTTGAAACTTGGTACTTTCAGATTCTTGTTTTGCTTGCTGGTCTTCTTCCTCAACCTGAGTTGGCTCTTGATTCTCTTTCTATTTGTACCACAGTTTCTGGATGGGTGTTCATGATCTCAGTTGGATTCAACGCAGCTGCAAGCGTGAGAGTAAGCAATGAACTAGGAGCAAGAAATCCAAAATCAGCATCATTTTCAGTGAAGGTGGTGACATTGATATCATTTGTAATATCAGTAATAGCAGCAGTGGTTGTGCTTGCATTGAAAGATGTTATTAGCTATGTGTTCACAGAAGGTGAAGCGGTTGCTGCTGCTGTCTCAGATCTTTGTCCACTTCTCTCTCTTTCTCTTGTCCTCAATGGCATTCAACCTGTCTTATCTGGGGTAGCTGTTGGGTGTGGATGGCAAGCTTTTGTTGCTTATGTGAATGTGGGCTGTTATTATATAGTTGGCATACCATTGGGCTCAGTTCTTGGCTTTTATTTTAATTTTGGTGCTAAGGGAATATGGCTAGGAATGCTTGGTGGAACAACTATGCAAACGATTATTTTAATGTGGGTCACATTTAGAACAGATTGGAACAAGGAGGTGGAAGAAGCAGCCAAGAGGTTGAACAAATGGGAGGAGAAAAAGGAGCCCCTTCTAAACTAA 1524 0.4173 MASLKQNGAEEPLLFTHSDAPSVKHHESDGELERILSDTTVPYFSRVGSATWIELKLLFFLAAPAVFVYLINYVMSMSTQIFSGHLGNLELAAASLGNTGIQIFAYGLMLGMGSAVETLCGQAFGAEKYDMLGIYLQRSTILLTITGFFLAIIYILSEPILIFIGQSPRIASAAALFVYGLIPQIFAYAVNFPIQKFLQAQSIVLPSAYISAATLVVHLILSWLVVFKIGLGLLGASLCLSLSWWIIVVAQFVYILKSEKCKRTWNGFTLEAFSGLPEFFKLSAASAVMLCLETWYFQILVLLAGLLPQPELALDSLSICTTVSGWVFMISVGFNAAASVRVSNELGARNPKSASFSVKVVTLISFVISVIAAVVVLALKDVISYVFTEGEAVAAAVSDLCPLLSLSLVLNGIQPVLSGVAVGCGWQAFVAYVNVGCYYIVGIPLGSVLGFYFNFGAKGIWLGMLGGTTMQTIILMWVTFRTDWNKEVEEAAKRLNKWEEKKEPLLN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1291 507 PANTHER MULTIDRUG RESISTANCE PROTEIN 11 494 - -
Mal4g1291 507 Pfam MatE 286 446 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal4g1291 507 Pfam MatE 64 224 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal4g1291 507 PANTHER PROTEIN DETOXIFICATION 11 494 - -
Mal4g1291 507 TIGRFAM matE: MATE efflux family protein 64 461 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Mal4g1291 507 CDD MATE_eukaryotic 54 490 IPR045069 GO:0042910|GO:1990961
Mal4g1291 507 Coils Coil 481 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g1291 Mal-Chr4 18670408 18676164 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1291 K03327 - gmx:100801718 800.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1291 4 18670408 18676164 Mal4g1291 4 18670408 18676164 ECH
Mal4g1291 4 18670408 18676164 Mal7g1685 7 57805707 57811223 PCT