Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g1045 ATGGATCGGCTTCTCAAATCTGCCAGATCTTCCGGTTCTCTCAACCTCTCCAACCGCTCCCTCAGTGAAGTTCCCGATGAAGTTTATCGCAATCTTGACGGAATCGGTGGTTCTGATGATAAATGGTGGGAGGCTGTGGAGCTTCAGAAACTCATTTTGGCTCACAATAGTATTGAATTGTTGAAGGAAGATATCAGAAATTTATCTTGTCTTGCTGTTTTGAATCTTAGCCACAATAGTCTTTCTCAGCTTCCTGCCGCCATAGGAGAGTTACCTCAGTTGAAGATGTTGGATGTTTCGCATAATTCGATACTTAGAATACCGGAGGAGATTGGATCAGCTGTGTCACTTGTGAAGTTTGATTGTTCAAATAATCAGCTCAAGGAACTTCCTAGTGAGCTAGGAAGATGCTTGGCGTTGTCGGACTTAAAGGGATCAAACAATCTTATTGAAAGCTTGCCAGAAGATTTAGCAAATTGTTCTAAATTGTCTAAGCTCGATATGGAGGGAAACAAGCTTACAGTGATATCCGAAAATCTCATTTCATCATGGACAATGCTTACTGAGTTAAATGCATCAAAAAATATGCTGAATGGCATACCAGTCGGCATTGGAGGCCTTTCACGTTTAATTCGTCTTGATCTCCATCAGAACAGAATCTCATCGATCCCTTCATCAATCATTGGCTGTCATTCACTTGCAGAGTTTTATTTGGGGAATAATAGTATTTCTACAATACCAGTGGAGTTAGGGGAACTTTCTCGGCTCGGGACATTAGATCTTCATTCTAACCAGCTGAAGGAGTATCCTGTGGAGGCTTGCAAATTGAGTCTTTTAGTCTTGAATCTTTCAAATAATTCATTGAGTGGGTTACCCCCTGAAATGGGTAAGATGACTAGCTTGAGGAAACTTCTGCTTAGTGGAAACCCCCTGCGGACTCTTCGAAGCTCATTAGTCACTGGACCTACACCAGCATTACTGAGATTTCTCCGGAGTAGACTTTCTGAAGGTGAAGATCCTGAAGCTACAACCACATCAAAAAAGGACATAATTACAATGGCTACCCGATTATCTATCACTTCAAAGGAACTTTCTATGGGAGGGTTGGGGTTGAGTGCTATTCCATCAGAAGTATGGGAATCAGAGGAGGTCATAAAACTTGATCTTTCCAAAAACTCAATCCAGGAGTTACCGGTTGAACTTTCTTATTGTGTTTCCCTCCAGACATTGATTTTATCAAAGAATCAAATTACGGACTGGCCAGGTTCAATTCTTAAATCGCTTTCAAGTCTTTTATGTTTGAAGCTGGACTACAATCCCCTCAGACAGATACCTTCAAATGGTTTTGAAGTGGTGCCTAAGCTTCAGATCCTGGATCTAAGTGGTAATGAAGCTTCATTACTAGGTGGCCCTGCATTTTCTAGTTTGCCAGACCTTCAAGAGCTTTACCTGAGAAAAATGCGTCTCACTGAAGTCCCGTCAGATATATTGGGGTTGCATCAACTACGGATCCTTGACTTGAGTCAGAATTCCCTTCAATCGGTTCCAGAGGGGCTAAAAAACATCACTTCTCTCGTGGAACTTGACCTATCTGATAACAACATCTCATCCCTTCCACCTGAGCTGGGTTTGCTGGAACCAACCCTTCAGGCGTTGAGACTTGATGGGAACCCACTTAGAAGCATTCGGAGGACTGTCTTGGATAAAGGAACTAAAGCTGTTCTGAAATATTTGAAGGACAAATTGCCAGAGCAGTAG 1758 0.4221 MDRLLKSARSSGSLNLSNRSLSEVPDEVYRNLDGIGGSDDKWWEAVELQKLILAHNSIELLKEDIRNLSCLAVLNLSHNSLSQLPAAIGELPQLKMLDVSHNSILRIPEEIGSAVSLVKFDCSNNQLKELPSELGRCLALSDLKGSNNLIESLPEDLANCSKLSKLDMEGNKLTVISENLISSWTMLTELNASKNMLNGIPVGIGGLSRLIRLDLHQNRISSIPSSIIGCHSLAEFYLGNNSISTIPVELGELSRLGTLDLHSNQLKEYPVEACKLSLLVLNLSNNSLSGLPPEMGKMTSLRKLLLSGNPLRTLRSSLVTGPTPALLRFLRSRLSEGEDPEATTTSKKDIITMATRLSITSKELSMGGLGLSAIPSEVWESEEVIKLDLSKNSIQELPVELSYCVSLQTLILSKNQITDWPGSILKSLSSLLCLKLDYNPLRQIPSNGFEVVPKLQILDLSGNEASLLGGPAFSSLPDLQELYLRKMRLTEVPSDILGLHQLRILDLSQNSLQSVPEGLKNITSLVELDLSDNNISSLPPELGLLEPTLQALRLDGNPLRSIRRTVLDKGTKAVLKYLKDKLPEQ* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g1045 585 ProSiteProfiles Leucine-rich repeat profile. 93 114 IPR001611 GO:0005515
Mal4g1045 585 ProSiteProfiles Leucine-rich repeat profile. 524 545 IPR001611 GO:0005515
Mal4g1045 585 SUPERFAMILY L domain-like 362 560 - -
Mal4g1045 585 Gene3D Ribonuclease Inhibitor 3 177 IPR032675 -
Mal4g1045 585 Pfam Leucine rich repeat 47 104 IPR001611 GO:0005515
Mal4g1045 585 Pfam Leucine rich repeat 209 266 IPR001611 GO:0005515
Mal4g1045 585 Pfam Leucine rich repeat 501 559 IPR001611 GO:0005515
Mal4g1045 585 Pfam Leucine rich repeat 406 463 IPR001611 GO:0005515
Mal4g1045 585 Pfam BspA type Leucine rich repeat region (6 copies) 136 195 IPR026906 -
Mal4g1045 585 ProSiteProfiles Leucine-rich repeat profile. 209 230 IPR001611 GO:0005515
Mal4g1045 585 SMART LRR_typ_2 382 404 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 428 451 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 476 498 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 405 427 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 160 183 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 522 545 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 253 276 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 298 321 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 68 89 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 499 521 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 91 114 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 115 137 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 207 230 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 547 569 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 452 475 IPR003591 -
Mal4g1045 585 SMART LRR_typ_2 277 297 IPR003591 -
Mal4g1045 585 SMART LRR_sd22_2 160 182 - -
Mal4g1045 585 SMART LRR_sd22_2 207 232 - -
Mal4g1045 585 SMART LRR_sd22_2 91 113 - -
Mal4g1045 585 SMART LRR_sd22_2 499 521 - -
Mal4g1045 585 SMART LRR_sd22_2 45 70 - -
Mal4g1045 585 SMART LRR_sd22_2 522 540 - -
Mal4g1045 585 ProSiteProfiles Leucine-rich repeat profile. 277 298 IPR001611 GO:0005515
Mal4g1045 585 SUPERFAMILY L domain-like 40 315 - -
Mal4g1045 585 SMART LRR_bac_2 91 110 - -
Mal4g1045 585 SMART LRR_bac_2 275 295 - -
Mal4g1045 585 SMART LRR_bac_2 160 179 - -
Mal4g1045 585 SMART LRR_bac_2 499 518 - -
Mal4g1045 585 SMART LRR_bac_2 114 133 - -
Mal4g1045 585 SMART LRR_bac_2 428 447 - -
Mal4g1045 585 SMART LRR_bac_2 68 87 - -
Mal4g1045 585 SMART LRR_bac_2 207 226 - -
Mal4g1045 585 PRINTS Leucine-rich repeat signature 499 512 - -
Mal4g1045 585 PRINTS Leucine-rich repeat signature 278 291 - -
Mal4g1045 585 ProSiteProfiles Leucine-rich repeat profile. 501 522 IPR001611 GO:0005515
Mal4g1045 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 14 132 - -
Mal4g1045 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 137 228 - -
Mal4g1045 585 PANTHER LRR RECEPTOR-LIKE KINASE 213 585 - -
Mal4g1045 585 PANTHER LRR RECEPTOR-LIKE KINASE 14 132 - -
Mal4g1045 585 PANTHER LRR RECEPTOR-LIKE KINASE 137 228 - -
Mal4g1045 585 Gene3D Ribonuclease Inhibitor 273 333 IPR032675 -
Mal4g1045 585 Gene3D Ribonuclease Inhibitor 178 272 IPR032675 -
Mal4g1045 585 Gene3D Ribonuclease Inhibitor 470 581 IPR032675 -
Mal4g1045 585 Gene3D Ribonuclease Inhibitor 334 468 IPR032675 -
Mal4g1045 585 ProSiteProfiles Leucine-rich repeat profile. 406 427 IPR001611 GO:0005515
Mal4g1045 585 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 213 585 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g1045 207 572 Receptor kinase-like Gene Family AT4G08850 23.607 5.63e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g1045 - - mtr:MTR_2g079560 979.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g1045 4 14551035 14561794 Mal4g1045 4 14551035 14561794 ECH