Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0961 ATGGATGTAAAGAGAAACAAGAAAATGCAGCTGCATATATCTCCAAGTTTGAGGCATGTTACTGTCCTTCCAGGGAAAGGACTTAAAGAGTTTATCAAAGTGAAAGTTGCGTCGCGGCGTCTTTCTTATAGGATGCTCTTCTATTCACTCTTGTTCTTCACATTTCTTCTGAGGTTTGTGTTTGTTTTAACAGCTGTGGATGGCATTGATGGACAGAACAAGTGCTCTACCATAGGTTGTCTAGGAAAAAAATTAGGGCCAAGGATTTTGGGTAGACGGCCTGAATCAACTGTCCCAGAAGTGATATACCAAACTTTAGATGAACCCCTTGGCAATGATGAACTAAAGGGAAGGTTTGATATTCCACAAACTTTAGAAGAGTTCATGATTAAAATGAAGGAAGGTGGATATGATGCCAAGACATTTGCAGTTAAACTTAGAGAAATGGTAACCCTTATGGAACAAAGGACTAGGTTGGCCAAAATCCAAGAGTATCTATATCGCCATGTAGCGTCAAGCAGCATACCGAAACAACTTCATTGTCTTGACTTGAGGTTAGCACATGAGCATACCAACAATGCAGCAGCACGCCTTCAGTTACCGTCTGCGGAACTAGTTCCTGCCCTTGTTGACAATTCCTATTACCATTTTGTCTTAGCCTCAGATAATGTCCTCGCTGCCTCGGTGGCTGCAACGTCGCTAGTTCGCAACTGTTTACGACCTAATAAGGTTGTTATACACATAATTACAGACAGAAAGACTTATTATCCGATGCAGGCTTGGTTCTCATTGCATCCTTTATCACCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTTCAAAGGGAAAAGTTCCTGTTTTAGAAGCAATGGAGAAAGATCAAAAGGTGCGGTCGCAGTTTAGAGGAGGTTCATCGGCAATAGTTGCGAATACATCTGAGAAGCCAAATGTTATTGCAGCAAAACTACAAGCACTTAGTCCCAAGTATAATTCAGTGATGAACCACATTCGGATACATCTACCCGAGTTGTTTCCAAGTCTTAACAAGGTGGTCTTCCTCGACGATGACATTGTGATACAAACTGATCTTACACCTCTGTGGGACATTGACATGAACGGAAAAGTGAATGGAGCAGTGGAAACATGTAATGGAGAAGACAAGTTTGTGATGTCGAAGAGGTTGAAAAGCTATTTGAACTTTTCTCACCCTCTAATATCTGAAAATTTCAATCCCAATGAATGTGCTTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATACGTATCACCATTGGGTTGAGCAGAATATTAAATCAGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCATTTCATGGCCATGTCCACATTATAGATCCTTTCTGGCATATGCTTGGATTGGGATATCAGGAAAATACAAATTATGATGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGACATAGCATTTCCTCAGCTAAGGTCATTGTGGACAAAATATATTGACTTCTCAGATAAGTTCATTAAAAGCTGTCACATTAGAGCATGA 1623 0.411 MDVKRNKKMQLHISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDGIDGQNKCSTIGCLGKKLGPRILGRRPESTVPEVIYQTLDEPLGNDELKGRFDIPQTLEEFMIKMKEGGYDAKTFAVKLREMVTLMEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVLASDNVLAASVAATSLVRNCLRPNKVVIHIITDRKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLNKVVFLDDDIVIQTDLTPLWDIDMNGKVNGAVETCNGEDKFVMSKRLKSYLNFSHPLISENFNPNECAWAYGMNIFDLEAWRKTNISNTYHHWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTNYDDVENAGVIHFNGRAKPWLDIAFPQLRSLWTKYIDFSDKFIKSCHIRA* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0961 540 SUPERFAMILY Nucleotide-diphospho-sugar transferases 215 538 IPR029044 -
Mal4g0961 540 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 19 538 IPR029993 GO:0047262
Mal4g0961 540 Pfam Glycosyl transferase family 8 217 514 IPR002495 GO:0016757
Mal4g0961 540 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 217 533 IPR029044 -
Mal4g0961 540 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 19 538 - -
Mal4g0961 540 CDD GT8_like_1 215 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0961 Mal-Chr4 12775327 12780258 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0961 9 540 Glycosyltransferase AT5G54690 79.588 0.0 872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0961 K20867 - gmx:100802623 971.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0961 4 12775327 12780258 Mal4g0961 4 12775327 12780258 ECH