Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0958 ATGGGGATGAAGAATGATGGACAAAAACAACAGCTTCTTCAACAAGGTGGTGTTGGTGTTGGAGTTGGTGGAAGAACCAATGGTTTCATACCTACCTCGTTTCGTGCTATCTCGAGTTATTTGAGGATTGTTTCATCCGGTGCTTCTACCGTTGCACGCTCTGCTGCATCGGTTGCTTCATCAATTGTGGATAGGGACGATGTTGCTGATCATGATCAGGTAATTTGGGCTGGTTTTGATAAGTTGGAGGGTGAGGGCGATATCGTTCAACAAGTACTTCTTCTAGGCTATCGGTCTGGCTTCCAGGTTTGGCATGTTGATGATTCCAATAATGTCCGTGACCTGGTTTCCAAATACGATGGTCCTGTTTCTTTTATGCAAATGGTTCCAAATCCTATTGCATCAAAAAAATCAGAAGACAAGTTTGCAAGCAGCCGCCCGTTGTTGGTTGTTTGTACCGATGGATTCTTCGGTGGAGGAAGCAATATTAAGGATGGATTGACTGGTCCTGTCAATGGAACCAATTCAAACTCCCATGACCAAATGAATGGCAGCTATATGCCAACTACTGTTCAGTTTTATTCTATGAAATCCCATTCATATGTTCATGTAATGAAGTTTAGATCCGTTGTTTATTCTGTACGGTGCAGTTCCCGAATAGTTGCGGTTTCTCAGTCTACTCAGATACATTGTTTTAATGCTACCAAATTAGAAAGAGAATATACTTTACTTACCAATCCAATAGTCATGAGTTGCCCTGGTTCTGGAGGCATAGGCTATGGACCACTTGCGGTGGGTCCAAGATGGCTAGCTTATAGTGGAAGTCCAGTTGCGGTCTCCAATTCTAGTCATGTCAGCCCTCAGCATTTGACGCCTTCTGCAAGCTTTCCGGGTTTTTCTTCAAACGGGAGCTTGATTGCACACTATGCCAAAGAGTCAAGCAAGCATCTTGCTTCTGGGATTGTGACACTCGGAGATATGGGATATAAGAAACTTTCTAGATACTGCTCTGATAACAATGGTTCGTTACAGTCTGTAAGTTCTGGACCAAAGGTCAATGGAACCGTTAATGGTCATTCGGCAGATTTAGATAACATTGGAATGGTCATTGTTAAAGATATTGTGACTAAAAACGTTGTTGCCCAATTCCGAGCTCACAAAAGTCCGATTTCAGCCTTATGCTTTGATCCTAGTGGCACCATATTAGTGACCGCTTCAGTTCAGGGTCATAACATAAATGTTTTTAAGATAATGCCTGTACGTGAGAATTCGTCAGCATCTGATGCCGGTCCTTCTTACGTTCATTTATACAGGCTGCAACGCGGTTTTACAAACGCGGTTATACAAGATATCAGTTTTAGTGACGATAGCAAGTGGATTATGATTAGTTCCTCAAGGGGCACTAGCCATTTATTTGCCATAAATCCTCAAGGAGGATATGTAAATATTCAGTCTAATGATGATAGTTTAACTACAAAAAATAATGGATTCAGCACTACGACTAATCAAGTAGTTCGCCGGGCTCCTACCATACAAATGCCTAAACAGCAAAGCTTGTATGTAGCTGGCCCTCCGATCACACTTTCTGTAGTAAGCAGAATTAGGAATGGAAGTAATGGTTGGAGAGGCACTGTCAGTGGTGCTGCTGCAGCTGCAACTGGTAGGAAGAGTCCCCTTTCTGGTGCTATTGCTTCATCTTTCCGTAACTGTAAAGGAAGTGGAGCCGTGTACAGTGAAGGGAACAATTCCAAGGCAAATCATCACTTGTTAGTCTTTTCACCTAGTGGATCAATGATACAGTATGCTCTTCGGACAATAAGTGGTCAAGATTCAGCTCTTGTTTCTGGATTATCTCCTGCTTATGAATCCACTCCACAGGCCGAAGCAAGATTAGTAGTTGAGGCCATGCATAAATGGAATATATGTCATAGTCATAGTCGGAGAGAGCGAGAAGATAATGTTGATATATATGGCGAAAATGGAATTTCAGACAGCAACAAAATATATCCGGAGGTTGTAGAGGAGGACATAGTTTGCCCGAAAATGAGAAACGGTGTCACAAAAGTGAATCCATGTCTCAAGGAAGAACATCATTTGTATATTTCAGAAGCTGAACTACAAATGCATCAAGCTCAGATTCCGTTGTGGGCGAAGCCAGAGATATATTTCAATTCAATGTTGAAAGAGTCTACCATAATGGATGAAGAAGCCGCTTCAGCAGGAGAATTCGAGATTGAAAGGATTCCAACTTGCATGATTGAAGCTAGACCAAAAGACTTGGTTCCAATTTTCAACTACATGCAGACCCCAAAATTACAACAAACAAGGGCTCCTGCTATGGACAGAAAGATAAATGAACAAGTGTTGCATCACGGTTCTGAGCCGTATGGAAATGGCAGGATCTCACCTAGGAGTGTTTCGGAATCTCCCGAGTGGCTGAATAATTCTGGTGGTGAAGTTATTACTGAACATAAAAGTCACATAGAAGGAACTGAGTGGGATAATCATGTGATGCCATCAGAAACTATTGGCTTTGTAAATAACAATGACAATCTTAAACCAAATACTCAGCATGAGATTGTAAATAATAGAAAAGAGCACTTAAACATGGGAGCTCAGCTCATGCTTGTAAATAGCGACAAAAGGCCTGAAAATGAGGAACATCTTGAAGAAAATGAAGATGAATTTGATTGA 2694 0.4157 MGMKNDGQKQQLLQQGGVGVGVGGRTNGFIPTSFRAISSYLRIVSSGASTVARSAASVASSIVDRDDVADHDQVIWAGFDKLEGEGDIVQQVLLLGYRSGFQVWHVDDSNNVRDLVSKYDGPVSFMQMVPNPIASKKSEDKFASSRPLLVVCTDGFFGGGSNIKDGLTGPVNGTNSNSHDQMNGSYMPTTVQFYSMKSHSYVHVMKFRSVVYSVRCSSRIVAVSQSTQIHCFNATKLEREYTLLTNPIVMSCPGSGGIGYGPLAVGPRWLAYSGSPVAVSNSSHVSPQHLTPSASFPGFSSNGSLIAHYAKESSKHLASGIVTLGDMGYKKLSRYCSDNNGSLQSVSSGPKVNGTVNGHSADLDNIGMVIVKDIVTKNVVAQFRAHKSPISALCFDPSGTILVTASVQGHNINVFKIMPVRENSSASDAGPSYVHLYRLQRGFTNAVIQDISFSDDSKWIMISSSRGTSHLFAINPQGGYVNIQSNDDSLTTKNNGFSTTTNQVVRRAPTIQMPKQQSLYVAGPPITLSVVSRIRNGSNGWRGTVSGAAAAATGRKSPLSGAIASSFRNCKGSGAVYSEGNNSKANHHLLVFSPSGSMIQYALRTISGQDSALVSGLSPAYESTPQAEARLVVEAMHKWNICHSHSRREREDNVDIYGENGISDSNKIYPEVVEEDIVCPKMRNGVTKVNPCLKEEHHLYISEAELQMHQAQIPLWAKPEIYFNSMLKESTIMDEEAASAGEFEIERIPTCMIEARPKDLVPIFNYMQTPKLQQTRAPAMDRKINEQVLHHGSEPYGNGRISPRSVSESPEWLNNSGGEVITEHKSHIEGTEWDNHVMPSETIGFVNNNDNLKPNTQHEIVNNRKEHLNMGAQLMLVNSDKRPENEEHLEENEDEFD* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0958 897 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 3 866 IPR045142 GO:0006914
Mal4g0958 897 Pfam Breast carcinoma amplified sequence 3 523 762 IPR022175 -
Mal4g0958 897 MobiDBLite consensus disorder prediction 791 811 - -
Mal4g0958 897 Gene3D - 298 520 IPR015943 GO:0005515
Mal4g0958 897 PANTHER AUTOPHAGY-RELATED PROTEIN 18F 3 866 - -
Mal4g0958 897 MobiDBLite consensus disorder prediction 878 897 - -
Mal4g0958 897 Pfam WD domain, G-beta repeat 380 409 IPR001680 GO:0005515
Mal4g0958 897 SMART WD40_4 198 233 IPR001680 GO:0005515
Mal4g0958 897 SMART WD40_4 432 473 IPR001680 GO:0005515
Mal4g0958 897 SMART WD40_4 376 416 IPR001680 GO:0005515
Mal4g0958 897 SUPERFAMILY WD40 repeat-like 92 475 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0958 Mal-Chr4 12715272 12720941 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0958 - - gmx:100784596 1347.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0958 4 12715272 12720941 Mal4g0958 4 12715272 12720941 ECH