Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0957 ATGGAGTCGATTCTGGGTCGGGCTCTCGAATACACTCTCAAATATTGGCTCAAATCCTTCACTAGAGATCAATTCAAATTGCATGGTCACACCGTTCACCTTTCCAATTTAGATATCGACGGTGATGCTTTGCATTCCAGTGTTGGATTACCGGCGGCGTTGAATGTTGCATCGGCGAAAGTTGGAAAACTCGAGATAACGCTTCCGTCGGTGAGTAATGTGCAAACGGAACCAATTGTTGTGCAAATTGATAAACTTGATCTTGTTCTTGAGGAGAATTCTGATTTTGATGCATCTTCAAGTTCAAACAGTTCCACCTCTTCGGCTGCGCCTGCCAAGGGTAGCGGTTATGGTTTTGCTGATAAGATTGCAGATGGCATGACTATACAAATTCATACAGTTAATCTATTACTTGAAACTCGCGGTGGTTCTCGTCGCCAAGAAGGGGGAGCAACATGGGCACCACCTATGGCATCTATGACTATACGCAACCTTATGCTGTATACCACAAATGAAAACTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAGTTCTCCACGAACAAAAAATACATATATGTCTTCAAAAAACTGGAATGGCAATCTTTGTCTATTGATCTTTTGCCGCATCCAGACATGTTCGCAGATGTTGAAGAGGGATCAAACCTGAGGGATGATGATGGTGCAAAAAGAGTATTCTTTGGAGGAGAGCGTTTTATCGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACTCAGTTGAACAGTCCACTTGGACTTGAGGTTCAATTGCACATCAATGAAGCTGTTTGCCCTGCGTTAAGTGAACCGGGACTTCGTGCTCTTCTTCGCTTTATGACCGGAGTATATGTTTGTCTAAACAGGGGTGACGTTGATTCAAAGGCTCAGCAGCGGTCCACTGAAGCAGCCGGATGTTCTCTCGTTTCAATTGTTGTAGATCATATATTTCTTTGCATTAAAGATACTGAATTCCAGCTCGAGCTTTTGATGCAGTCCCTCTTTTTCTCTAGAGCCAGTCTTTCTGAAGTGGATAACGACAAGAACTTGACCAAGATTACAATTGGTGGATTATTTTTGAGGGACACCTTTTCTTCCCCTCCATGTACTTTAGTGCAACCATCAATGCAAGCTGTCACCGGAGAGGCTTTTCATGTGCCAAAATTTGCTAGAAGTTTTTGCCCTCCAATATACCCTCTAGGAGAACAACAATGGCAGTTGACCGAGGGTACCCCTCTAATATGCCTCCATGCTCTCCAGATCATACCTTGTCCACTTCCACCATCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCTCTTATGATTCATCTCCAAGAAGAGTCATGCCTGAGGATATCCTCTTTTTTAGCTGACGGTATTGTTGTCGGTCCTGGTGACATTTTACCAGACTTCTCAGTGAAATCTTTTATTTTTACTCTCAAGGGACTGGATCTTACAGTTCCTTTTGACAAGGAAAAATTGGATATTTCTACAAGTGACATGGACAATACAATCAGTACCTCCTTTACTGGAGCAAGGCTTCATATTGAAAGCCTTTCATTTATAGATTCACCTTCATTGAAACTAAGAATACTGAACCTTGAGAAGGATCCTGCTTGCTTCTGTCTTTGGGAAGGTCAGCCAGTTGATGCTACCCAGAAGAAGTGGACTGTCAGAGCATCCCAGCTTACATTGTCTCTGGAAGCATGCACGGGTACAACTGGACGTCAGAATGCAGGATTGTGGAGATGTGTTGATCTGACAGAAGCTTGCATTGAAGTAGCCATGGCAACTGTCGATGGAAGCCCGTTGTTAAAAATTCCTCCTCCAGGGGGTATTGTCAGGGTTGGAGTTGCTTGCGAACAGTATGTGTCCAACACTTCTGTTGAGCAATTATTTTTCGTCCTAGATCTCTATGGTTATTTTGGAAAAGTTAGTGAAATGATGTCAGTTGCTGGAAAAAGGAAACAACTGGAGGACGTTGGGGACAAATCTTTCAGTGGAAAGCTTATGGACAAGGTTCCTAGCGACACTGCTGTGAGTTTAGCAGTGAAAGACCTCCAACTTCGATTCCTGGAGTCTTCATCAATAAATGTTGAGGGACTGCCATTAGTGCAATTTGTTGGAGATGATCTGTTTACCTGTGCCACTCACAGAACCCTTGGTGGGGCTATTGTTGTTTCATCTTCTCTACGCTGGGAGAGTGTTGAGATAAGTTGTGTGGATGCTGAGGGGAAGTTGGCATGTGAATCCTTGAGTCCTAGCATGAATGCTCCTTCACCGAGTGATAATGGATATCCTCATCTCAGAGCTGTATTCTGGGTGCATAAGAACGAGAGACATCTAATGGATGGAAATGCACGTTCTTTCCCTTTTCTGGACATAAGCACGGTTCATGTCATACCATTACACGAACAAGACCCGGAGTCTCATAGTTTGAATGTCTCAGCTTTTGTATCTGGTGTTCGTCTTGGTGGGGGAATGAACTATACTGAAGTCCTACTGCATAGATTTGGAATACTTGAGCCTGATGGAGCTCCTGGGAAGGGTCTTTGTAAAGGGTTGGAAAACTTACAAAAGGGACCATTGTCAAAACTTTTTAAGTCAAATCCTCTGATTGTTGATAATTCAGAAGATGTTGAAAGCACGGGTGAAGGGAAAGAAACAGGTTTTCCCCACTTGAAGAAGCCAGATGATGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTCGAAGGTGCAGAGGATACGGCTGAAAAGTGGTGGTTCTCCAGTCACGAAGATGAAGGAAGAGAAGAGAGATGTTGGCACACATCTTTCCATAGTTTACAAGTAAATGCAAAAGGTAGCCCGAATAATGTTTCTGGTGGAAAAGGACAAATACATAGAATACGGCATCATCCAGTAGAACTGGTTACGGTTGGAGTTCAAGGGCTGCAAATCCTGAAGCCTCGTTTCCAAAAAAACATTCCTTCATCACTGGTAATAGGCAATGGGGTTAAGGAGTTTACTGATGCAGTTGGAGGAGTTGGTCTTGAAGTTCGCTTGATATTAAGTGAGGACGATGTTCGTGATGAGACGACTAACTGGGAAGTGGAAAATCTAAAATTCTCTGTACAACAGCCGGTTGAGGCAGTTGTAACGAAGGATGAGCTTCAGCATCTTACTTTTTTGTGCAAATCTGAAATTGATTCAATTGGCCGGATAACTGCTGGAATTATACGGTTGCTTAAGTTAGAAGGCTCTGTTGGTCAGTCTGTAATAGATCAACTAGGCAACCTAGGAAGCGAAGGCATTGACAAGATTTTCTCTGGTGACAAGGTTAGTAGAGACGGTAGTATTGGTAGTAGAGGACTTTCTCCATTACCAAACCTGATAAGCGAAGAACCAAACAAAACTCCGGAACAGACATTAGCTTTGCTTGAGGAAGCAGTTATGGATTCACAGGCTAAAATCAATGATTTAATCAGTGATATTGGTACCTCAGAGTCTTCTTCCTCTCAACACCTTACTGTGATCAAACTGAGTCAAAAGATCGAGACTATGCAGGGACTATTGATGCAATTGCGGAATCAACTTTGA 3615 0.4293 MESILGRALEYTLKYWLKSFTRDQFKLHGHTVHLSNLDIDGDALHSSVGLPAALNVASAKVGKLEITLPSVSNVQTEPIVVQIDKLDLVLEENSDFDASSSSNSSTSSAAPAKGSGYGFADKIADGMTIQIHTVNLLLETRGGSRRQEGGATWAPPMASMTIRNLMLYTTNENWQVVNLKEAREFSTNKKYIYVFKKLEWQSLSIDLLPHPDMFADVEEGSNLRDDDGAKRVFFGGERFIEGISGEAYITIQRTQLNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGVYVCLNRGDVDSKAQQRSTEAAGCSLVSIVVDHIFLCIKDTEFQLELLMQSLFFSRASLSEVDNDKNLTKITIGGLFLRDTFSSPPCTLVQPSMQAVTGEAFHVPKFARSFCPPIYPLGEQQWQLTEGTPLICLHALQIIPCPLPPSFASQTVIDCQPLMIHLQEESCLRISSFLADGIVVGPGDILPDFSVKSFIFTLKGLDLTVPFDKEKLDISTSDMDNTISTSFTGARLHIESLSFIDSPSLKLRILNLEKDPACFCLWEGQPVDATQKKWTVRASQLTLSLEACTGTTGRQNAGLWRCVDLTEACIEVAMATVDGSPLLKIPPPGGIVRVGVACEQYVSNTSVEQLFFVLDLYGYFGKVSEMMSVAGKRKQLEDVGDKSFSGKLMDKVPSDTAVSLAVKDLQLRFLESSSINVEGLPLVQFVGDDLFTCATHRTLGGAIVVSSSLRWESVEISCVDAEGKLACESLSPSMNAPSPSDNGYPHLRAVFWVHKNERHLMDGNARSFPFLDISTVHVIPLHEQDPESHSLNVSAFVSGVRLGGGMNYTEVLLHRFGILEPDGAPGKGLCKGLENLQKGPLSKLFKSNPLIVDNSEDVESTGEGKETGFPHLKKPDDVDVTIELRDWLFALEGAEDTAEKWWFSSHEDEGREERCWHTSFHSLQVNAKGSPNNVSGGKGQIHRIRHHPVELVTVGVQGLQILKPRFQKNIPSSLVIGNGVKEFTDAVGGVGLEVRLILSEDDVRDETTNWEVENLKFSVQQPVEAVVTKDELQHLTFLCKSEIDSIGRITAGIIRLLKLEGSVGQSVIDQLGNLGSEGIDKIFSGDKVSRDGSIGSRGLSPLPNLISEEPNKTPEQTLALLEEAVMDSQAKINDLISDIGTSESSSSQHLTVIKLSQKIETMQGLLMQLRNQL* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0957 1204 Coils Coil 1183 1203 - -
Mal4g0957 1204 Coils Coil 1149 1169 - -
Mal4g0957 1204 Pfam N-terminal region of Chorein or VPS13 1 104 IPR026854 -
Mal4g0957 1204 PANTHER UNCHARACTERIZED 1 1203 IPR026728 -
Mal4g0957 1204 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0957 Mal-Chr4 12595755 12605910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0957 - - gmx:100803142 1982.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0957 4 12595755 12605910 Mal4g0957 4 12595755 12605910 ECH