Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0950 ATGGATTATGAACCTCCCTTTATGAAGAAATACAAGACCCTATTTGAAAAAAATCTTGGAGATAATTCAGAAAATGATTTGTACTCTATGGTAGAGGGAAGTGAGGAACTACCTTTGATTGATCTTGAGAAGTTAAATCTTGAAGATCCTAAAAGAGAAGAATGCATGAAAGAAATAAGTGAAGCTGCTAGTGAATGGGGATTCTTTCAAGTTACTAATCATGGAATTTCCAATGAGATTCTTGAGAACATGATAACTGAACAAAAGAAATTGTTCTATCAGCCTTTTGTGGATAAATTATCTGCAGAAACTGTCTTTAATTTGTCTCCAAAAACATATAGATGGGGGAATCCATGTGCTACCAATCTAAGACAGCTTTCTTGGTCAGAAGCCTTTCATTTTTCTCTGACAGATATACCAAATATGGGTCAACACATAAATCTGAGATCAAGCCTTGAAGCTTTTGCAACAAGAATGGCCACTCTTGCCGAAAACTTGGCGGAGATTCTTGCCCTCAAAGTGAATATGAAATCAAACCATTTCCAAGAGAATTACTTGCCAAAAAGTTCTTTCATTCGACTCAATCGATATCCTCCATGCCCTATATCTTCAAAGGTGTATGGCATCTTGCCTCATAGTGACACTAGTTTCCTTACCATCCTCTATCAAGATAGTGTTGGAGGATTGCAATTGATGAAAGATGGAAAATGGGTTGATGTCAAGCCTAATCCATGTGCTCTAGTTGTTAATATTGGTGATTTATTTCAGGCATTGAGCAATGATGTTTACAAAAGCATAAAACACAGAGTGGTTGCTGCTGAGCAAGAGAGGTTTTCTACCGCATTTTTCTATTGCCCCTTCAACGATGCAGTTATACAAAGTGAAAACAAGCCAGCTGTATATAAGAAATTCACTTTGAGGGAGTTTAGACAGCAGACTCAGAAAGATGTTAATAAAACGGGGGATAAAGTGGGGCTCTCTAGATTTGTTCGTTAG 996 0.3725 MDYEPPFMKKYKTLFEKNLGDNSENDLYSMVEGSEELPLIDLEKLNLEDPKREECMKEISEAASEWGFFQVTNHGISNEILENMITEQKKLFYQPFVDKLSAETVFNLSPKTYRWGNPCATNLRQLSWSEAFHFSLTDIPNMGQHINLRSSLEAFATRMATLAENLAEILALKVNMKSNHFQENYLPKSSFIRLNRYPPCPISSKVYGILPHSDTSFLTILYQDSVGGLQLMKDGKWVDVKPNPCALVVNIGDLFQALSNDVYKSIKHRVVAAEQERFSTAFFYCPFNDAVIQSENKPAVYKKFTLREFRQQTQKDVNKTGDKVGLSRFVR* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0950 331 Pfam 2OG-Fe(II) oxygenase superfamily 192 286 IPR044861 -
Mal4g0950 331 Gene3D - 34 327 IPR027443 -
Mal4g0950 331 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 324 - -
Mal4g0950 331 SUPERFAMILY Clavaminate synthase-like 30 316 - -
Mal4g0950 331 Coils Coil 331 331 - -
Mal4g0950 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 37 137 IPR026992 -
Mal4g0950 331 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 8 324 - -
Mal4g0950 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 286 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0950 Mal-Chr4 12472087 12484040 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0950 36 311 Glycosyltransferase AT5G59530 32.765 3.84e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0950 - K04125 lja:Lj0g3v0081939.2 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0950 4 12472087 12484040 Mal4g0950 4 12472087 12484040 ECH