Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0936 ATGTGGAGAGATCCAGGAGTTTCAGCTGATTCTTTCTATGAAACCAGACCAGATTGCAGCAGTGATGTTCCCATTACAAAATTTAAGATCAAGGCTGGTAAAACACTAAGTCCAAGAAAATGGCATGATGCATTTACTCAAGAAGGATATCTCGATATAGGCAAGACTCTGAGACGAATTTGCCGAGGGGGAGTCCATCCATCAATTAGGGGAGAAGTTTGGGAATTTCTACTTGGTTGCTACGATCCCAAGAGTACATTTGACGAAAGAGATCAGATAAGACAACGCCGAAGGAGGCAGTATATTACTTGGAAAGAAGAATGTCGCCAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTATCACATCACCTGTAATTAGTGAAGATGGCCAGCCAATTCAAAATCCGTTGGTTATGCCAGAAACAAATCCAACCAAGGGATTGACTGTACTTTCTCAAGATAATAGTAGCCCTTCAACTATTGATTCTGCAAATAATTTAGAAAATGTGACAGATAAGAAACTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGATGTGATTCGCACTGATAGGACATTGGTTTTTTATGAGAAGCAAGAAAACTTGTCAAAACTTTGGGATATTCTTGCAGTTTATGCTTGGATAGATAAAGAAGTTGGGTACGGTCAAGGAATGAGTGACCTATGCTCCCCAATGATAATTCTTCTTGACGATGAAGCAGACGCATTTTGGTGCTTTGAGCGTCTGATGCGCAGACTTCGAGGGAATTTCAGATGTACTGGTCGCACTCTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAATTGATCCAAAACTTCATAAACATATAGAACATATCGGTGGAGGCGACTATGTATTTGCTTTTCGGATGCTTATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCGTTGTACCTATGGGAGATGATGTGGGCTCTAGAATATGATCCTTCCATGTTCTTGATGTATGAAGAAGCTCAATCTGCTTCCGAAAAAGCCGTGGGCGTCAAAGGAAAAGCAAAGTCAATACGACAATGTGGAAAATACGAGAGAGAAAATATGAGAAATGGAGCAAAGAATGCTGAATCTCCTCTTCCTATATCTGTTTTCCTTGTTGCTAGTGTGTTGAAAGATAAAAGTACAAAACTACTCCATGAAGCGCGAGGCTTGGATGATGTTGTCAAGATATTGAATGACACGACTGGAAATCTAGATGCCAAAAAGGCATGCATGGAGGCTATGAAGCTTCACAAAAAATATTTGAGAAAGGCCAAGAAAGCCTAG 1332 0.4017 MWRDPGVSADSFYETRPDCSSDVPITKFKIKAGKTLSPRKWHDAFTQEGYLDIGKTLRRICRGGVHPSIRGEVWEFLLGCYDPKSTFDERDQIRQRRRRQYITWKEECRQLFPLVGSGRFITSPVISEDGQPIQNPLVMPETNPTKGLTVLSQDNSSPSTIDSANNLENVTDKKLIQWMLTLHQIGLDVIRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTGRTLGVEAQLSNLASITQVIDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPSMFLMYEEAQSASEKAVGVKGKAKSIRQCGKYERENMRNGAKNAESPLPISVFLVASVLKDKSTKLLHEARGLDDVVKILNDTTGNLDAKKACMEAMKLHKKYLRKAKKA* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0936 443 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 162 260 - -
Mal4g0936 443 Pfam Rab-GTPase-TBC domain 164 330 IPR000195 -
Mal4g0936 443 SMART tbc_4 61 353 IPR000195 -
Mal4g0936 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 268 436 IPR035969 -
Mal4g0936 443 Gene3D - 267 443 - -
Mal4g0936 443 ProSiteProfiles TBC/rab GAP domain profile. 64 330 IPR000195 -
Mal4g0936 443 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 1 443 - -
Mal4g0936 443 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 1 443 - -
Mal4g0936 443 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 41 290 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0936 Mal-Chr4 12049728 12054605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0936 - - aprc:113854580 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0936 4 12049728 12054605 Mal4g0936 4 12049728 12054605 ECH