Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0934 ATGACTACTGCAAGCAAAATCAAATCCGTTGATTTTTACAGAAAAATCCCAAGAGATTTAACCGAGGCGTCATTATCTGGAGCAGGGTTATCCATAGTAGCAGCTCTTGCCATGATGTTTTTATTTGGAATGGAACTTAGTGATTATTTATCTGTCAGCACATCTACATCTGTGATTATTGACAAGAGTTCTGATGGGGAATTTTTACGGATAGATTTCAATTTCAGTTTTCATGCACTCTCATGTGAGTTTGCTTCAGTTGATGTGAGCGATGTGCTGGGAACAAACAGAATGAATCTAACAAAAACAGTTCGCAAGTTTTCTATCAATTCAAATTTAAGACCCACTGGGTCTGAATTTGTCTCACGTCCAGCTACCAACGTCATTAAGCATGATGATAAAGTGGATGGAGAATCTCTTGAAGGTGCTTTTGTATTCACGTCCGGCAATTTTGATAAATATGCTCATCATTTTCCAATTATAGCTGTAAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAGACCTTCATGGGAGAAGGCAGCTAAAATAATAAGAGAGAGATATGATCCAGAAATGGATGGTCGAATACTTTTGGGGAAGGTAGATTGCACTCAAGAAGTAGACTTGTGCCGGAGGCATCACATACAAGGGTATCCATCCATTCGTATCTTTCGTAAAGGAAGTGATGTCAGAGACGACCATGGACATCATGATCATGAGTCCTATTATGGTGATCGTGATACAGATAGCCTTGTTAAGACAATGGAGAATATAGTGGCGTCTCTCCCTTCAGAGTCTCAGAAGCGAGCTTTGGGGGATAAATTAAATGTTACAGAGAATGCAAAAAGACCAGCACCATTAGCCGGGGGATGTAGAATTGAAGGATATGTACGTGTCAAGAAGGTTCCAGGAAACTTGATCGTCTCAGCAAGATCTGATGCCCACTCCTTTGATGCTTCTCAAATGAACATGTCTCATGTCATACACCATTTATCGTTTGGAAGGAAATTGTCGCCTAGGGTTATGGATGATGTCAGGCGCCTGATACCTTATGTTGGTAACAGCCATGACAGGCTGGATGGTCTGGCATTCATCAATACACATGATTTAGGAGCAAATGTTACTATGGAGCACTACCTTCAGATAGTTAAAACTGAAGTGATTACTAGACAAAATTATCAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGTGTAGCACACAGTTTACACATTCCTGTTGCGAGGTTCCATCTCGAACTTTCCCCCATGCAGGTCTTGATAACAGAACATCAGAAGTCTTTTTCACATTTTATTACAAACGTCTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTACGGAATCGATTTTGCACAACACTATTAGGCTAGTGAAAAAAGTTGAGCTGGGCAAGAATTTTTGA 1443 0.4047 MTTASKIKSVDFYRKIPRDLTEASLSGAGLSIVAALAMMFLFGMELSDYLSVSTSTSVIIDKSSDGEFLRIDFNFSFHALSCEFASVDVSDVLGTNRMNLTKTVRKFSINSNLRPTGSEFVSRPATNVIKHDDKVDGESLEGAFVFTSGNFDKYAHHFPIIAVNFYAPWCYWSQRLRPSWEKAAKIIRERYDPEMDGRILLGKVDCTQEVDLCRRHHIQGYPSIRIFRKGSDVRDDHGHHDHESYYGDRDTDSLVKTMENIVASLPSESQKRALGDKLNVTENAKRPAPLAGGCRIEGYVRVKKVPGNLIVSARSDAHSFDASQMNMSHVIHHLSFGRKLSPRVMDDVRRLIPYVGNSHDRLDGLAFINTHDLGANVTMEHYLQIVKTEVITRQNYQLVEEYEYTAHSSVAHSLHIPVARFHLELSPMQVLITEHQKSFSHFITNVCAIIGGVFTVAGITESILHNTIRLVKKVELGKNF* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0934 480 ProSiteProfiles Thioredoxin domain profile. 119 263 IPR013766 -
Mal4g0934 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 1 480 IPR045888 -
Mal4g0934 480 Gene3D Glutaredoxin 140 287 - -
Mal4g0934 480 CDD PDI_a_family 145 258 - -
Mal4g0934 480 Pfam Thioredoxin 145 243 IPR013766 -
Mal4g0934 480 PANTHER PROTEIN DISULFIDE-ISOMERASE 5-3 1 480 - -
Mal4g0934 480 Pfam Endoplasmic reticulum vesicle transporter 290 459 IPR012936 -
Mal4g0934 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 7 97 IPR039542 -
Mal4g0934 480 SUPERFAMILY Thioredoxin-like 145 261 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0934 Mal-Chr4 12001297 12009870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0934 - - gmx:100806869 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0934 4 12001297 12009870 Mal4g0934 4 12001297 12009870 ECH