Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0823 ATGGTTGTCATGGAGGAATTCAAGCACTTTGTGATTGTTAAGTTCAAAGAAGGTGTCGTAGTGGAAGAGCTTACAAAAGGGATGGAGAAATTGGTCTCAGACATTGATCTTGTCAAGTCCTTTGAATGGGGACAGGATATTGAAAGCCTAGATGTGTTGAGACAAGGTTTCACTCATGCCTTCTTGATGACATTCAACAAGAAAGAAGACTTTGCTGCATTTCAGAGCCATCCAAATCATGTTGAGTTTTCTGAAAAGTTTTCAACAGCTATTGAAAAGATTGTGCTGCTTGATTTCCCATCTACCCTTGTCAAGCCAGTCAAGGAAGCAGCATAA 336 0.4018 MVVMEEFKHFVIVKFKEGVVVEELTKGMEKLVSDIDLVKSFEWGQDIESLDVLRQGFTHAFLMTFNKKEDFAAFQSHPNHVEFSEKFSTAIEKIVLLDFPSTLVKPVKEAA* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0823 111 PANTHER - 4 108 IPR044662 -
Mal4g0823 111 Pfam Stress responsive A/B Barrel Domain 8 100 IPR013097 -
Mal4g0823 111 SMART Dabb_2 7 101 IPR013097 -
Mal4g0823 111 Gene3D - 3 111 - -
Mal4g0823 111 PANTHER EXPRESSED PROTEIN 4 108 - -
Mal4g0823 111 SUPERFAMILY Dimeric alpha+beta barrel 6 101 IPR011008 -
Mal4g0823 111 ProSiteProfiles Stress-response A/B barrel domain profile. 7 99 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0823 Mal-Chr4 9857028 9857637 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0823 - - pvu:PHAVU_005G126400g 187.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0823 4 9857028 9857637 Mal4g0823 4 9857028 9857637 ECH
Mal4g0823 4 9857028 9857637 Mal7g1930 7 69250115 69251341 PCT