Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0808 ATGGATCAAGAGGTAGGAAGCATACTTGACTTTCTTGAGAACAAGACCATTTTGGTTATTGGTGCAACTGGTTTTCTTGCAAAAATATTTGTGGAGAAGGTATTGAGAGTTCAACCAAATGTTAAAAAGCTTTTTCTTCTTTTAAGAGCCTCTGATGACAAATCTGCAGCTAGTCGCTTGCAAAATGAGCTATTAGCGAAGGACTTGTTTAATTTGCTAAAAGAAAAACTTGGTACAAATTTCAAGTCTTTTATTTCGGAAAAGTTGGCTGTGGTGCCTGGGGATATCACTTTTGATGACTTGGGTTTGAAGGATTCCATTTTAAGGGAAGATATTTCCTCTCAAACAGATGTTATTATTAATTTGGCTGCAACTACTAACTTTGATGAAAGGTATGATATAGCATTGGATCTAAATACATTTGGAGTTAAACATATCATGAGCTTCGCGAAACAATGTCTCAAATTAAATGTGCTTGTCCATGTATCAACAGCTTATGTATGTGGTGAAAAAAGTGGTCTCATACTAGAAAGTCCCTATCACTTTGGTGATTCATTAAATGGTGTAGCTGGATTAGACATCAACACCGAAAAGAACTTAGTAACCGAAAAATTAGGTAAGCTACGAGAGAAAGGAGCCACGGAGCATGAAATTAAAGTGGCCATGAAGGACTTAGGTATTACAAGGGCAAATGTGTATGGATGGCCAAACACATACGTGTTTACAAAGGCACTTGGGGAGATGGTTGTTGAACAATTAAAAGGAAACTTATCTGTCGTTATTTTGCGTCCTGCCATTGTCACAAGTACATTAAGAGAACCTTTCCCTGGTTGGGTTGAGGGTGTCAGAACCATTGACAGTTTAGGTGTTGCTTATGGGAAAGGAAAACTAACATGTTTCCTTGGAGATCTCAACGGTGTTGTTGATGCGATACCAGCAGACATGGTGGTAAATGCAATGTTAGTGGCTATGGTGGGTCATGCAAATCAACCTAGAGAAGGGGTATATCATGTGGGTTCCTCTGTTAGAAACCCATTGGTATACCTTAATCTCCATGACTATGCATTAAGATATTTCAAGGCAAAACCATGGATAAATAAAGAGGGAACAATTGTTAAGGTTGGCAATATGACTATATTACCCGACATGGCTAGCTTCCAAAGATATATGTTCATTCGCTACCTTCTTCCGTTAAAGGGACTCAAGCTGGCCAATACAGCTCTTTGCCAATATTTTCAGGGAACTTATCTTGAGCTCAATAGGAAGATTCAGGTTGTGATGCGGTTGGTGGAACTTTACAGGCCTTATTTATTCTTCAAGGGCATATTTGATGATATAAACACTGAGAAGTTGCGGATGGCAGCAAGACAAAGTGGAACAGAGATAGATTTATTTTACTTCGACCCAAAAGAGATAGATTGGGAAGATTACTTTATGAACACTCATATCCCTGGTTTAGTCAAGTATATTTTCAAGTGA 1479 0.3834 MDQEVGSILDFLENKTILVIGATGFLAKIFVEKVLRVQPNVKKLFLLLRASDDKSAASRLQNELLAKDLFNLLKEKLGTNFKSFISEKLAVVPGDITFDDLGLKDSILREDISSQTDVIINLAATTNFDERYDIALDLNTFGVKHIMSFAKQCLKLNVLVHVSTAYVCGEKSGLILESPYHFGDSLNGVAGLDINTEKNLVTEKLGKLREKGATEHEIKVAMKDLGITRANVYGWPNTYVFTKALGEMVVEQLKGNLSVVILRPAIVTSTLREPFPGWVEGVRTIDSLGVAYGKGKLTCFLGDLNGVVDAIPADMVVNAMLVAMVGHANQPREGVYHVGSSVRNPLVYLNLHDYALRYFKAKPWINKEGTIVKVGNMTILPDMASFQRYMFIRYLLPLKGLKLANTALCQYFQGTYLELNRKIQVVMRLVELYRPYLFFKGIFDDINTEKLRMAARQSGTEIDLFYFDPKEIDWEDYFMNTHIPGLVKYIFK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0808 492 Gene3D - 10 373 - -
Mal4g0808 492 CDD FAR-N_SDR_e 15 363 - -
Mal4g0808 492 Pfam Male sterility protein 393 492 IPR033640 -
Mal4g0808 492 Pfam Male sterility protein 21 320 IPR013120 -
Mal4g0808 492 CDD FAR_C 392 491 IPR033640 -
Mal4g0808 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 341 IPR036291 -
Mal4g0808 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 4 491 IPR026055 GO:0080019
Mal4g0808 492 PANTHER FATTY ACYL-COA REDUCTASE 4 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0808 Mal-Chr4 9475611 9486475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0808 115 491 Acyl Lipid Metabolism Gene Families AT4G33790 61.273 2.16e-178 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0808 K13356 - gmx:100788680 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0808 4 9475611 9486475 Mal4g0808 4 9475611 9486475 ECH
Mal4g0808 4 9475611 9486475 Mal7g1898 7 66494166 66502826 PCT