Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0623 ATGTCAATGCCATCATCACTCACATTTTCACTCTTAATGGCTCCTCTCTTCTCTCTTTTATTCTCATTTATGATTAGTAGTAGTAATGCTGAGGGTCCACCTTCACCAGAGTACTACCCTAGTTCCAAAGTAAGCACTATTAGCTTTGATCAAGGATTTAGAAACCTTTGGGGACCTCAGCATCAGAAACTAGACCATGGATCATTATCAATCTGGCTTGACTCTACCACAGGGAGTGGATTCAAGTCATATCACTCTTATAAATCTGGATATTTTGGTACTGCGGTTAAGCTTCAACCAGGTTATACTGCAGGAGTCAATACAAATTTATATCTTTCAAACCACGAAGATCACCCAGGAAACCATGATGAAATAGACATTGAGTTCCTTGGTACTACACAAGATAAGCCATATGTGTTGCAGACAAATGTGTACATAAGAGGAAGTGGAGATGGGAGGATTATAGGAAGAGAGATGAGATTTCATCTTTGGTTCGACCCAACACAAGATTTTCACAACTATGCCATTCTATGGAAACCTAGTGAGATCATATTTTTAGTGGATGATGTTCCAATAAGGAGGTATCCTAGGAAGAGTGATGCAACATTCCCTTCAAGACCAATGTATGTGTATGGATCAATATGGGATGCATCTTCATGGGCTACAGAGAATGGTAAATACAAAGCAAATTATACTTACCAACCCTTCATTGGAAGATACAAAAACTTCAAACTACAAGGTTGTACAACTGGTCCCACCTCCTCCTCATGCCGGCCGCCTTCTGTCTCACCTCCCGGCTATGGCGGCAAGTTGAGCCGTCAGCAAAATGTTGCAATGCAATGGGTCCAAAAAAATTACTTAGTCTACGATTATTGTCATGATCCTAAGAGAGACCATACATTTACTCCAGAATGCTAA 918 0.4041 MSMPSSLTFSLLMAPLFSLLFSFMISSSNAEGPPSPEYYPSSKVSTISFDQGFRNLWGPQHQKLDHGSLSIWLDSTTGSGFKSYHSYKSGYFGTAVKLQPGYTAGVNTNLYLSNHEDHPGNHDEIDIEFLGTTQDKPYVLQTNVYIRGSGDGRIIGREMRFHLWFDPTQDFHNYAILWKPSEIIFLVDDVPIRRYPRKSDATFPSRPMYVYGSIWDASSWATENGKYKANYTYQPFIGRYKNFKLQGCTTGPTSSSCRPPSVSPPGYGGKLSRQQNVAMQWVQKNYLVYDYCHDPKRDHTFTPEC* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0623 305 Pfam Glycosyl hydrolases family 16 50 232 IPR000757 GO:0004553|GO:0005975
Mal4g0623 305 SUPERFAMILY Concanavalin A-like lectins/glucanases 48 305 IPR013320 -
Mal4g0623 305 PIRSF EndGlu_transf 10 305 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mal4g0623 305 Gene3D - 29 305 - -
Mal4g0623 305 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 270 305 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Mal4g0623 305 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 16 305 IPR044791 GO:0004553
Mal4g0623 305 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 28 240 IPR000757 GO:0004553|GO:0005975
Mal4g0623 305 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 31 16 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0623 Mal-Chr4 6370939 6373062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g0623 11 305 Glycoside Hydrolase AT3G44990 62.034 8.77e-139 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0623 K08235 - gmx:100776165 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0623 4 6370939 6373062 Mal7g2024 7 72807076 72809557 PCT