Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0598 ATGTCCGGCTTACTTAATTCTTCTCTGAACGGATCTACTTCAAATCTTCCTGACGGTGCTGGACGGTCTTTTACTTCATCGTTCTCTAGTCAGTCCGGTGCACCCTCCCCAATTTATCAGCACACTGGTGGTATTCAAGGGTTGCACAACATGCACGGGAGCTTTAACATTCCCAACATGACCAGTACACTTACATCAAGAAACTCAACGATAAATAGCATGCCAACTGGAGCGGTTCAGCAACCTACATCAAGTCTTTCAAGTGGAAGATTTACATCAAATAATCTTCCTTCTGCTCTCTCACAGCTATCTCATGGAAGCTCTCACGGACATTCAGGAGTCAACAGTAGAGGAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCTCGGATAACAAGTTCTATGGGAAACATGGTTGCTGGAGGGAACATTGGGAGGATAAGCTCTGGAGGATTGTCCATTCCTGGTCTTGCTTCACGTCTAAATTTAAATGGAAACAGCGGATCTGGTGGTTTAGGCGTGCAAGGACAAAATCGATTGATGAGTGGTGTTCTTCCACAAGGATCTCCTCAGGTAATGTCAATGCTAGGAAATTCTTATCCCAGTGCTGGAGGTCCACTTTCACAAAGCCACATTCAAGCAGTACATCACTTGAATTCTATGGGGATGTTGAATGATTTGAATTCTGGTGACAGTTCACCCTTTGACCTCAATGACTTCCCTCAGCTATCAAGTCGTCCTAGTTCTGCTGGGGGGCCTCAAGGACAGTTGGGCTCTTTACGAAAACAGGGTCTTAGTCCTATTGTGCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGACTTTCCAGCTTTACCAGGATACAAAGGTGGTAATGGAGAATTTACTATGGATATGCATCAGAAAGAACAACTTCACGACAATGCTATGTCAATGATGCAGTCACAGCATTTCTCCATGGGGAGATCTGCTGGTTTCAGTTTGGGAGGATCTTATTCATCACATCGTACTCAACAGCAACAGCAACATGCTCCTTCTGTCAGTAACAGTGGGGTCTCTTTCTCATCTGTGAACAATCAAGATCTTCATCTGCATGGGTCGGATGTTTTTCCGTCTTCAAACACTTCGTATCATTCACAGACCAGCGGGCCTCCCGGCATTGGGTTAAGGCCTCTAAATTCTCCAAATACTGTTTCTGGTACGGGTCCATATGATCAGCTCATCCAGCAGTATCAACAACACCAGAACCAGTCCCAGTTTCGTCTTCAGCAAATGTCAGCTGTAAATCAGTCCTTTAGGGATCATGGCATGAAGTCTATGCAAACTGCACAATCTGCTCCTGATCCATTTGGTTTGCTTGGCTTGTTAAGTGTAATCAGGATGAGTGATCCAGATCTGACATCTCTTGCTCTTGGAATCGATCTTACAACACTCGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACCTTTGGGTCTCCTTGGTCTGAGGAACCAGCTAAGGGTGATCCAGAGTTTAGTGTGCTTCAATGTTATTATGCTAAACCACCTCCTGCTCTACATCAAGGATATTTTGCGAAGTTTACTTTGGAAACGCTGTTTTACATATTTTACAGCATGCCCAAAGATGAAGCACAACTATATGCAGCAAATGAACTTTACAAACGGGGTTGGTTTTATCACAAAGAGCATCGCATGTGGTATATAAGAGTTCCCAACATGGAGCCGCTTGTCAAAACAAATACATACGAAAGAGGATCTTACCACTGTTTTGATCCAAGCACTTTTGAAACTGTCCGGAGGGATAATTTTGTTCTTAATTATGAAATGGTGGAAAAGAGACCGTCTTTGCCACAACATTGA 1872 0.4343 MSGLLNSSLNGSTSNLPDGAGRSFTSSFSSQSGAPSPIYQHTGGIQGLHNMHGSFNIPNMTSTLTSRNSTINSMPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHGHSGVNSRGGLGVSPILGNAGPRITSSMGNMVAGGNIGRISSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRLMSGVLPQGSPQVMSMLGNSYPSAGGPLSQSHIQAVHHLNSMGMLNDLNSGDSSPFDLNDFPQLSSRPSSAGGPQGQLGSLRKQGLSPIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLHDNAMSMMQSQHFSMGRSAGFSLGGSYSSHRTQQQQQHAPSVSNSGVSFSSVNNQDLHLHGSDVFPSSNTSYHSQTSGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIRVPNMEPLVKTNTYERGSYHCFDPSTFETVRRDNFVLNYEMVEKRPSLPQH* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0598 623 Gene3D - 442 623 IPR038635 -
Mal4g0598 623 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 2 122 - -
Mal4g0598 623 Pfam NOT2 / NOT3 / NOT5 family 492 613 IPR007282 GO:0006355
Mal4g0598 623 PANTHER CCR4 NOT-RELATED 120 623 IPR040168 GO:0030015
Mal4g0598 623 MobiDBLite consensus disorder prediction 60 119 - -
Mal4g0598 623 MobiDBLite consensus disorder prediction 60 114 - -
Mal4g0598 623 MobiDBLite consensus disorder prediction 1 39 - -
Mal4g0598 623 PANTHER CCR4 NOT-RELATED 2 122 IPR040168 GO:0030015
Mal4g0598 623 MobiDBLite consensus disorder prediction 326 405 - -
Mal4g0598 623 MobiDBLite consensus disorder prediction 227 262 - -
Mal4g0598 623 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 120 623 - -
Mal4g0598 623 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0598 Mal-Chr4 6032238 6037703 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0598 K12605 - gmx:100806559 1031.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0598 4 6032238 6037703 Mal4g0598 4 6032238 6037703 ECH
Mal4g0598 4 6032238 6037703 Mal7g2186 7 77902049 77907175 PCT