Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0452 ATGGCTTCAAACAATGGCATCCCAACCACAGGCACAGGTCTCATCGTAAGCTTCGGCGAGATGCTGATCGACTTTGTCCCAACCGTCTCCGGCGTCTCCCTCGCAGAGGCTCCCGGTTTCCTCAAAGCCCCCGGCGGTGCACCAGCCAACGTCGCCATCGCTGTTTCCCGACTCGGAGGCAAAGCCGCCTTTGTCGGGAAACTGGGCGATGACGAGTTCGGCCACATGCTCGCCGGGATCTTGAAGGAAAACGGTGTGGTCGCCGAAGGTATAACTTTTGACCAAGGAGCACGTACTGCTTTGGCGTTTGTTACTCTACGCGCCGATGGAGAGCGTGAGTTTATGTTTTATAGAAATCCTAGTGCTGACATGCTTCTTAAACCTGAAGAACTTAACCTCGAACTCATCAGATCTGCAAAAGTTTTCCATTATGGATCCATAAGCTTGATTGTGGAGCCATGTAGATCAGCACACTTGAAGGCAATGGAAGTTGCCAAAGAAGCTGGGGTCCTTCTCTCCTATGATCCAAACCTCCGCCTACCCTTGTGGCCCTCAGCTGATGAAGCTCGCAAGCAAATATTGAGTATCTGGGAAAAGGCTGATTTGATCAAGGTTAGTGATAATGAGCTGGAGTTCCTCACCGGAAGTGACAAAATTGATGATGCTACTGCTTTGACGTTGTGGCACCCCAACTTGAAGTTGCTCCTTGTCACTCTCGGTGAACATGGCGCAAGATACTACACCAAGAATTTCCATGGACAAGTAGATGGATTCAAAGTCAATACAGTTGATACAACTGGTGCTGGTGATTCCTTTGTTGGTGCTCTATTGGCCAAGATTGTTGATGATCAGGCCATACTAGAAGATGAACCAAGGTTAAGAGAAGTACTCAAGTTTGCAAATGCATGTGGAGCAATCACAACTACTAAAAAGGGAGCAATTCCTGCTCTTCCCAAGGAGGAGGATGTACTTAACCTGTTCAAAGCATAG 990 0.4848 MASNNGIPTTGTGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVSRLGGKAAFVGKLGDDEFGHMLAGILKENGVVAEGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKEAGVLLSYDPNLRLPLWPSADEARKQILSIWEKADLIKVSDNELEFLTGSDKIDDATALTLWHPNLKLLLVTLGEHGARYYTKNFHGQVDGFKVNTVDTTGAGDSFVGALLAKIVDDQAILEDEPRLREVLKFANACGAITTTKKGAIPALPKEEDVLNLFKA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0452 329 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Mal4g0452 329 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Mal4g0452 329 PANTHER BNAA04G18320D PROTEIN 20 324 - -
Mal4g0452 329 Gene3D - 13 329 IPR029056 -
Mal4g0452 329 SUPERFAMILY Ribokinase-like 15 327 IPR029056 -
Mal4g0452 329 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Mal4g0452 329 PANTHER HEXOKINASE FAMILY MEMBER 20 324 - -
Mal4g0452 329 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Mal4g0452 329 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Mal4g0452 329 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Mal4g0452 329 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0452 Mal-Chr4 3945267 3947802 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0452 K00847 - gmx:100803713 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0452 4 3945267 3947802 Mal4g0452 4 3945267 3947802 ECH
Mal4g0452 4 3945267 3947802 Mal7g2426 7 84770078 84772839 PCT