Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g0252 ATGGGTGCTTCTCTTCCACCTAAAGAGGCCAACCTCTTCAAACTCATTGTTAAATCCTATGAAACCAAACAATACAAAAAGGGTCTTAAAGCCGCTGATGCCATTTTGAAAAAGTTTCCAGATCATGGAGAAACTTTATCGATGAAGGGTTTGACATTAAATTGCATGGATCGTAAATCTGAAGCATATGAACTGGTTCGCCAAGGATTGAAGAATGACCTTAAGAGTCATGTTTGCTGGCATGTTTATGGTCTTCTCTATCGGTCCGACCGAGAATACAGGGAAGCAATCAAGTGCTATCGAAATGCACTAAGGATAGATCCTGACAATATTGAAATCTTACGTGATCTATCTCTCTTACAGGCTCAAATGCGAGATTTATCTGGCTTTGTTGAGACGCGACAACAACTTCTGACTCTCAAGTCAAATCATCGCATGAACTGGATTGGATTTTCTGTTGCACATCATTTGAACTCTAATGCATCAAAAGCTATTGAAATTCTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGGATTGAGCATGGCGAAATGATTTTATATAAGGTCTCTTTGTTAGAGGAATGTGGATTTTTTGAAAGAGCTCTTGAGGAGTTGCAGAAGAAGGAGTCAAAAATAGTTGATAAGCTTGGATATAAAGAACAAGAGGTTTCGCTAATAGTCAAGCTTGGTCGCTTAGAAGAAGGCGAGAAATTGTACCAGACATTGCTTTCCATGAATCCAGACAATTATAGATATTATGAAGGCCTTCAACGATGTGTTGGGTTACATTCAGAAAATGGTCAATTTTCTCCTGATGAAACAGATCGATTAGATACCCTGTACAAAACACTTGGGCAGCAATTTAAGCGGTCATCTGCTGTTAAGAGAATACCATTAGATTTTCTTCAAGGTGATAGATTTCGAGAAGCAGCAGATAGTTATATTAGGCCTCTCCTAACTAAGGGAGTTCCATCTCTATTCTCAGATCTTTCTTCTTTATACAATCACCCCGGGAAGGCAGACATTTTGGAACAGCTTATTCTTGAGTTAGAGAATTCTATTAGGACGACTGGTCAATACCCTGGGAGGGAGGAAAAAGAACCCCCTTCAACTCTTATGTGGACTTTGTTCTTGTTGGCTCAGCATTATGACAGGCGCGGCCAATATGAAATCTCACTTTCTAAAATCAACGAGGCTATAGAACACACACCTACTGTCATTGATCTATACTCTGCCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCATTTGCAGATGAAGCTAGGTGTATGGATCTCGGTGATCGTTATGTTAATAGTGACTGTGTGAAACGCATGCTGCAGGCTGATCAGGTGGTTTTGGCAGAAAAAACTGCCGTGCTATTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCTGCTGAAAGCTATTTCCGTCAAGGGGATCTTGGACTGTCTCTCAAAAAATTCTTAGCAGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTAAGGAAAATGACATTGCGTACATATGTGGAAATGCTTCAATTTCAAGACAAATTGCATTCACATGCATATTTTCGTAAAGCAGCTGCTGGAGCTATCAGATGTTATATAAAATTGCACGATTCTCCTCCAAAATCAACAGCTGAGGAGGATGATGAAATGTCAAAGTTGCTTCCTGCTCAGAAAAAGAAATTGAAGCAAAAACAGAGAAAGGCAGAAGCAAGAGCTAAAAAAGAGGCAGAAGAGAAAAACGAAGAATCAAGTGCTAGTGGGATATCAAAGTCTGGGAAACGTCATACAAAACCTGTTGATCCAGATCCTCGGGGGGAAAAGTTGTTGCAGGTTGAAGATCCATTGTTGGAAGCCACAAAATACTTGAAGTTGCTGCAGAAGAATTCATCTGATTCATTAGAGACACACTTGCTCTCCTTTGAATTATACATGAGAAAACAGAAGATTTTGCTAGCCTTCCAGGCTTTGAAGCAATTACTGAGATTGGATGCTGAACACCCGGATTCTCATCGTTGCTTGATTAAATTCTTCCATAAAGTGGGATCCATGAATACTCCTGTGACTGACAGTGAGAAACTTGTTTGGAGTGTCTTAGAAGCTGAGCGCCAAACTATAAGCAGTCAGTTGCACGGGAAATCTCTGCTTGAGGCAAATAACTTTTTCCTTGAAAAACACGAAGGCTCTTTGATGCATAGAGCTGCTTTTGGGGAAATGATGTACATTTTAGATCCCAATAGAAGATCTGAGGCTGTCAAGTTGATTGAAGGGTCAACAAATAACCCTGTGTCAAGAAATGGCGCACTTGGACCAATCCGGGAATGGAGACTTAAAGACTGTATTGCAGTTCATAAACTTCTTGGATCAGTCCTTGATGATCAGGATGCTGCATTGAGATGGAAAGTGCGATGTGCTGAGTTTTTCCCATACTCCACATACTTTGAGGGCAGTCAAAGCTCTGCCACACCCAACTCTGCTCTCAATCAAATATGCAAGACAACTGTTAATGGGAGTTCCAGCCATTCACCGGGAAAACATGTTGTGGAAAATGTTGCATCAAACGGCAAACTAGAAACATTTAAAGATCTCACTATCTGA 2709 0.4068 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKSNHRMNWIGFSVAHHLNSNASKAIEILEAYEGTLEDDYPPENERIEHGEMILYKVSLLEECGFFERALEELQKKESKIVDKLGYKEQEVSLIVKLGRLEEGEKLYQTLLSMNPDNYRYYEGLQRCVGLHSENGQFSPDETDRLDTLYKTLGQQFKRSSAVKRIPLDFLQGDRFREAADSYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELENSIRTTGQYPGREEKEPPSTLMWTLFLLAQHYDRRGQYEISLSKINEAIEHTPTVIDLYSAKSRILKHAGDLAAAAAFADEARCMDLGDRYVNSDCVKRMLQADQVVLAEKTAVLFTKDGDQHNNLHDMQCMWYELASAESYFRQGDLGLSLKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLQFQDKLHSHAYFRKAAAGAIRCYIKLHDSPPKSTAEEDDEMSKLLPAQKKKLKQKQRKAEARAKKEAEEKNEESSASGISKSGKRHTKPVDPDPRGEKLLQVEDPLLEATKYLKLLQKNSSDSLETHLLSFELYMRKQKILLAFQALKQLLRLDAEHPDSHRCLIKFFHKVGSMNTPVTDSEKLVWSVLEAERQTISSQLHGKSLLEANNFFLEKHEGSLMHRAAFGEMMYILDPNRRSEAVKLIEGSTNNPVSRNGALGPIREWRLKDCIAVHKLLGSVLDDQDAALRWKVRCAEFFPYSTYFEGSQSSATPNSALNQICKTTVNGSSSHSPGKHVVENVASNGKLETFKDLTI* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g0252 902 MobiDBLite consensus disorder prediction 577 646 - -
Mal4g0252 902 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 884 - -
Mal4g0252 902 MobiDBLite consensus disorder prediction 577 594 - -
Mal4g0252 902 SUPERFAMILY TPR-like 12 440 IPR011990 GO:0005515
Mal4g0252 902 Coils Coil 195 215 - -
Mal4g0252 902 Gene3D - 2 503 - -
Mal4g0252 902 Pfam TPR repeat 84 123 - -
Mal4g0252 902 PIRSF NAT_A 1 819 IPR021183 -
Mal4g0252 902 Pfam N-terminal acetyltransferase A, auxiliary subunit 186 696 IPR021183 -
Mal4g0252 902 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Mal4g0252 902 MobiDBLite consensus disorder prediction 631 646 - -
Mal4g0252 902 PANTHER BNAC02G23120D PROTEIN 10 884 - -
Mal4g0252 902 Coils Coil 596 620 - -
Mal4g0252 902 Gene3D - 505 726 - -
Mal4g0252 902 MobiDBLite consensus disorder prediction 606 622 - -
Mal4g0252 902 SMART tpr_5 380 413 IPR019734 GO:0005515
Mal4g0252 902 SMART tpr_5 43 76 IPR019734 GO:0005515
Mal4g0252 902 SMART tpr_5 77 110 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g0252 Mal-Chr4 1322687 1336603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g0252 K20792 - gmx:100776968 1547.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g0252 4 1322687 1336603 Mal4g0252 4 1322687 1336603 ECH
Mal4g0252 4 1322687 1336603 Mal7g0151 7 3562043 3579879 PCT