Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4828 ATGGCACCAGCAATCACCAACGCCGCCGTCAATGCTACCGTCGAGAAACCAAAAGTTGACGGTGGTAAAGGCCGTGCCTTTGTGACTTTCCTTGCTGGAAACGCTGATTACATCAAAGGTGTTGTTGGTTTAGCCAAAGGGTTGAGAAAAACCAGAACCATGTACCCTTTGGTTGTTGCTATCTTACCTGATGTTCCTGAAGAACATCGTAAGATCCTTGTTTCACAAGGTTGCATTGTTAAGGAGATTGCCCCTGTGTACCCTCCACCCAACCAAACCCAGTTTGCTATGGCATATTATGTCATCAATTACTCCAAACTTCGTATCTTTGAGTTTGAGGAGTACAGCAAGATGATCTACTTGGATGGTGATATCCAAGTGTTTGAAAACATTGACCATCTATTTGATCTGCCTGATGATTACTTTTATGCTGTGATGGACTGTTTCTGCGAGAAGACTTGGAGTCACACCCCTCAGTATAAGATTGGATACTGTCAACAATGTCCTGATAAGGTTCAATGGCCATCTAACTTTGGTCCCAAGCCTCCTCTCTATTTCAATGCTGGAATGTTTGTTTTTCAGCCTAATGTTGCCACATATCATGATCTGCTTGAGAAAGTTAAAATTACCAAACCAACCCCCTTTGCTGAGCAGGACTTTTTGAACATGTATTTCAAGGATAAATACAAGCCTATACCTAATGTGTACAATCTTGTGTTGGCCATGATGTGGCGTCATCCTGAGAATGTTGAGCTTGAGAAAGTTCAAGTTGTTCACTATTGTGCTGCTGGCTCTAAGCCTTGGAGGTACACTGGAGAGGAACAGAACATGGACAGAGAAGACATCAAGATGTTGGTGAAGAAATGGAAAGAGATATATGAGGATGAGACATTAGATTATAACAACAATGTCAGAGTGGAACGTTTCACAGCTGCTCTGTTAGAGGCTGGTGGTCTGAAGTCATTGCCTGCATCAAATGCTGCTTAA 987 0.4255 MAPAITNAAVNATVEKPKVDGGKGRAFVTFLAGNADYIKGVVGLAKGLRKTRTMYPLVVAILPDVPEEHRKILVSQGCIVKEIAPVYPPPNQTQFAMAYYVINYSKLRIFEFEEYSKMIYLDGDIQVFENIDHLFDLPDDYFYAVMDCFCEKTWSHTPQYKIGYCQQCPDKVQWPSNFGPKPPLYFNAGMFVFQPNVATYHDLLEKVKITKPTPFAEQDFLNMYFKDKYKPIPNVYNLVLAMMWRHPENVELEKVQVVHYCAAGSKPWRYTGEEQNMDREDIKMLVKKWKEIYEDETLDYNNNVRVERFTAALLEAGGLKSLPASNAA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4828 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 326 - -
Mal3g4828 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 303 IPR029044 -
Mal3g4828 328 PANTHER GALACTINOL SYNTHASE 2 1 326 IPR030515 GO:0006012|GO:0047216
Mal3g4828 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 28 297 IPR029044 -
Mal3g4828 328 CDD GT8_Glycogenin 25 295 - -
Mal3g4828 328 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4828 Mal-Chr3 128350967 128353103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4828 1 328 Glycosyltransferase AT1G56600 72.485 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4828 K18819 - gmx:100800249 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4828 3 128350967 128353103 Mal3g4828 3 128350967 128353103 ECH
Mal3g4828 3 128350967 128353103 Mal1g1533 1 19957478 19959082 PCT