Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4823 ATGGGGTTCCAAAACTTGGGTTTTATAGTGTTTTTGGTGACAATATTGAATGTACTTGTTGGTCAATATGTGAATTGCAAGGGTATTAATGGTAACCATCATCATTATCATCATCAACATCATCATAACTCACACGCTCACTCAGCCAATAGTAAAACTAGATTTTATGAAAATGGTTTCGTTCAACGAAATGGAACTCATTTTGTTTTGAATGGAAAATCATTGTACCTCAACGGGTTCAATTCCTATATGTTAATGAGCATAGCATCGGACCCATCAACAATATCCAAAGTTACCACAACTTTTAAGGAAGCGTCCCAAAATGGTTTGAATTTAGCAAGAACATGGGCCTTCAATGATGGAGGTTATAAAACCCTTCAAATTTCACCTGGTTATTATGATGAGGATGTATTCAGGGCATTGGATTTTGTGATATCAGAAGCAGGTAAAAATGGAGTGCAATTGATACTAAGCTTAGTGAATAACTGGAATGATTATGGTGGAAAAAATCAATATGTCAAATGGGCCAAAGAACGTGGCCAGAACGTGAACAATGACGATGATTTCTTCATACATCCCATTGTTAAACAATATTACAAAAACCATGTCACGGCTATTTTGACGAGAAATAATAGTATTACTGGATTGGCATATAAGGACGACCCGACCATTTTTGCATGGGAGCTTATGAATGAACCTCGTTCTCAAAGCGACACTTCCGGCAAAACATTTCAGAGTTGGGTGAGTGAAATGGCTGCTTATGTGAAATCTGTTGATAGCAACCATTTACTAGAAGTTGGTCTTGAAGGATTTTATGGTGAATCAATGCTGGAAAAGAATCCCGGGTATGGAGTTGGAACTGATTTCATTTCCAATAACCAAGTTACTGAAATTGATTTCGCCACCATTCATCTCTACCCTGAATCATGGGTATCAAGCTCAGACGAAACTGCCCAAGATACATTTGTTGACAAGTGGGTTCAAACCCATATTCAAGACTCAAAAGACGTTTTAAATAAGCCAATTCTGATTAGTGAGTTTGGAAAGTCTTCAAAATATTCTGGATATAGTGTGGAGAAGAGGAACAATTACTTTCGAAAGCTATATAATTTCGTATACGATAGTGCTAGCAATGGAGGTCCTTGTGTTGGTGCGCTTTTCTGGCAGTTCATGGCCCAAGGATTGGATAACTTCCATGATGGATATGAAGTTGTATTTAAGGACAACCCTTCAACTGCTGTTGTTATTAGTCAACAATCTAAGAGATTGTCAAATCTCAAATAG 1284 0.3738 MGFQNLGFIVFLVTILNVLVGQYVNCKGINGNHHHYHHQHHHNSHAHSANSKTRFYENGFVQRNGTHFVLNGKSLYLNGFNSYMLMSIASDPSTISKVTTTFKEASQNGLNLARTWAFNDGGYKTLQISPGYYDEDVFRALDFVISEAGKNGVQLILSLVNNWNDYGGKNQYVKWAKERGQNVNNDDDFFIHPIVKQYYKNHVTAILTRNNSITGLAYKDDPTIFAWELMNEPRSQSDTSGKTFQSWVSEMAAYVKSVDSNHLLEVGLEGFYGESMLEKNPGYGVGTDFISNNQVTEIDFATIHLYPESWVSSSDETAQDTFVDKWVQTHIQDSKDVLNKPILISEFGKSSKYSGYSVEKRNNYFRKLYNFVYDSASNGGPCVGALFWQFMAQGLDNFHDGYEVVFKDNPSTAVVISQQSKRLSNLK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4823 427 Gene3D Glycosidases 55 427 - -
Mal3g4823 427 PANTHER - 43 427 IPR045053 GO:0004553
Mal3g4823 427 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 43 427 - -
Mal3g4823 427 Coils Coil 416 427 - -
Mal3g4823 427 SUPERFAMILY (Trans)glycosidases 60 416 IPR017853 -
Mal3g4823 427 Pfam Cellulase (glycosyl hydrolase family 5) 89 362 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4823 Mal-Chr3 128270174 128273057 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4823 57 427 Glycoside Hydrolase AT1G02310 55.118 2.66e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4823 K19355 - gmx:100791612 616.305