Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4819 ATGGGGACTGAAAATCCTACTCGTCCAAACTTTGCTTCAAGACCTACTTCCTCGCCTTTTGCTCCCACTGCTGCTATGACACCTTTTTCATCAATGGGTCCTGTGGCTGGATCAGAGCCTCCTTCGTTGCGACCTACTCCTGCTGCACCTCCCCAAGCCTCCACACCGTTTTCATCGTCTGGACCTGCTGTTAGACCGGGGGCACCCAGTTTTAGACCTACACCGCCGGGCAGGTTCAATGATCCATCAGTGCCTCCTCCTCCGTCATCCAATGTCCCGCCAGTGCCAGCTGCTGGAACTTTCCAGCACTTTCCACCACCACCCTTTTCGTCGACAGTTCAGCCTCCTCTCACACGGCCTCCACCCTTGGGACAACCATCATTTCAACAACATGCAAGTCAACCACCTCCCTTTCCCTCATCTATTCCACCTCAGCCACAGATGCCTTATGTTCAAATGGGGTCTCCACCTATGGGTTCAAATGTTTCTCCTCCTCAATTTCAGCCATCTGTTCCTGGATATCCCCGTATGCAGCCTGGTGCGGAAATGCAAGCTCCACCTATGCATTCCACTATTCATGCAAATCAAGGAAATTACGGACCTCCACCGCCTGCAGCATCATCTCCCTTTTTACCTCATCAAGGAGGCTATGCTTCATCACTCCCAATGGCTACTCCAATAGGTGTCCATCCAACACAGCAACCAGGATATGTTCCCTCTACTGGTGCCATTCAGGGCTTGACAGAAGACTTTAGTTCGCTCACAGTGCAAACTCGTCCTGGAACAATGGATCCATTATTTGATGCTAAAGAACTTCCAAGGCCGTTGGATGGTGACGTGGAGCCGAAGAATTTGGCTGAGGTTTATCCCATGAATTGCAATCCCAGATATCTGCGATTCACTACCAGTGCAATTCCAAGCTCTCAGTCCTTAGCTTCAAGGTGGCATCTGCCTCTTGGAGCAGTTGTATGTCCACTTGCTGAATCTCCGGAAGGGGAAGAGGTGCCTATAATTAGTTTTGCTCCAGCTAGTGTTGTACGCTGTAGAAGATGCCGCACATATGTGAATCCTTATGTGACATTTACAGAAGCTGGAAGAAAGTTCCGGTGCAATGTATGCACCTTGCTCAATGATGTTCCTAGTGAATATTATGCACAGTTAGATGCCACTGGAAAAAGAGTTGATTTGAATCAACGACCCGAGCTTACAAAGGGTACTGTAGAATTTGTTGCCCCTGCTGAGTATATGGTGCGGCCTCCTATGCCGCCAGTGTACTTCTTCCTCATTGACGTTTCCATGTCTGCAGTTAGAAGTGGCATGATTGAGGTTGCGGCCCAAACAATCAAGTCCTGCTTAGATGAGCTGCCTGGCTATCCACGAACACAAATAGGGTTTGCAACTTTTGACAGCACTATACATTTTTATAACATGAAGTCAACCTTGGCTCAGCCACAGATGTTGGTAGTCTCAGATCTGGATGACATATTTATTCCACTGCCAGATGATCTTCTTGTTAACTTATCTGAGTCAAGAAGTGTGGTGGAAGCCTTCCTAGATAGTTTGCCAACTATGTTTCAAGATAATGTTAATCTGGAATCAGCTTTTGGTCCTGCTCTTAAGGCTGCTTTCATGGTTATGAGTCAACTTGGAGGGAAATTATTAATTTTTCAAAACACACTTCCATCTCTTGGTGTTGGTCGCTTGAAATTACGGGGAGATGATTCTCGTGTGTACGGAACTGATAAAGAACATGGACTGAGACTGCCCGAAGATCCATTTTATAAGCAAATGGCTGCTGAGTTTTCTAAGTACCAAATCTCAGTAAATGTGTATGCATTCAGTGATAAGTACACTGACATAGCTTCATTAGGAACTCTGGCAAAGTACACTGCTGGTCAAGTGAATTACTATCCAGCTTTCCAATCAGCCATTCATGGGGAGAAATTGAGTCATGAATTAAGGAGAGACCTCACCAGAGAGACTGCATGGGAAGCTGTCATGCGTATCAGATGTGCAAAAGGTGTTCGCTTCACAACTTATCATGGAAACTTCATGCTAAGGTCCACAGATTTGTTAGCACTTCCAGCTGTAGATTGTGATAAAGCCTTCGCAATGCAGTTATCACTTGAAGAGACATTATTGACAACTCAGACTATTTATTTTCAAGTGGCATTGCTTTATACCGCATCTTGTGGAGAAAGGCGTATCAGAGTACACACAATGGCAGTTCCAGTAGTTACAGACTTGGCGGATATCTATCGCCTGGCTGATACTGGTGCAGTTGTCTCTCTATTTTGTAGGCTAGCAATTGAGAAAACATTGTCCCAAAAACTGGAAGATGCACGGAGTGCTGTGCAACTAAGAATTGTGAAAGCCCTCAAGGAGTATCGAAACCTTTATGCTGTGCAACATCGCTTGGCTAACCGGATGATATATCCCGAGTCTTTAAAGCTCCTAATGCTGTATGGATTAGCTCTTTGTAGATCAATGGCTCTACGTGGAGGGTACGGTGATGTTCCACTGGATGATCGATGTGCAGCAGGACATACAATGATGACTCTACCAATAAAAAGATTGTTGAAACTTCTCTATCCTAGCTTGATTCGACTTGATGAATATCTTCTGAAGCCATCTGTACAAGCTGATGACTTAAAAAGTATCGAGAGAAGGTTACCTTTGACCGGGGAGAGCTTAGACTCTAGGGGCCTTTATATATATGATGATGGCTTCCGGTTTATTATATGGTTTGGTAGGGTGATTTCACCTGATATAGCAAAGAATTTACTTGGTGCAGACTTTGCGGCAGAATTATCAAAGGCTACTCTACATGAGCATAATAATGAAATGTCAAGGAGGCTGATGAGGGTACTTGAAAAATTAAGAAATGATGATCATGCATATTACCAGTTGTGCCACCTTGTGAGGCAAGGTGAACAGCCCAAAGAAGGATTCCTCCTTCTTGCAAACCTTGTTGAGGACCATATGGGTAGTAACAGTGGGTATGTTGATTGGATGCTACAGATATCCCGACAAGTGCAACACTCATAA 3048 0.4501 MGTENPTRPNFASRPTSSPFAPTAAMTPFSSMGPVAGSEPPSLRPTPAAPPQASTPFSSSGPAVRPGAPSFRPTPPGRFNDPSVPPPPSSNVPPVPAAGTFQHFPPPPFSSTVQPPLTRPPPLGQPSFQQHASQPPPFPSSIPPQPQMPYVQMGSPPMGSNVSPPQFQPSVPGYPRMQPGAEMQAPPMHSTIHANQGNYGPPPPAASSPFLPHQGGYASSLPMATPIGVHPTQQPGYVPSTGAIQGLTEDFSSLTVQTRPGTMDPLFDAKELPRPLDGDVEPKNLAEVYPMNCNPRYLRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPEGEEVPIISFAPASVVRCRRCRTYVNPYVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSMSAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDSTIHFYNMKSTLAQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVEAFLDSLPTMFQDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNTLPSLGVGRLKLRGDDSRVYGTDKEHGLRLPEDPFYKQMAAEFSKYQISVNVYAFSDKYTDIASLGTLAKYTAGQVNYYPAFQSAIHGEKLSHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDKAFAMQLSLEETLLTTQTIYFQVALLYTASCGERRIRVHTMAVPVVTDLADIYRLADTGAVVSLFCRLAIEKTLSQKLEDARSAVQLRIVKALKEYRNLYAVQHRLANRMIYPESLKLLMLYGLALCRSMALRGGYGDVPLDDRCAAGHTMMTLPIKRLLKLLYPSLIRLDEYLLKPSVQADDLKSIERRLPLTGESLDSRGLYIYDDGFRFIIWFGRVISPDIAKNLLGADFAAELSKATLHEHNNEMSRRLMRVLEKLRNDDHAYYQLCHLVRQGEQPKEGFLLLANLVEDHMGSNSGYVDWMLQISRQVQHS* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4819 1015 MobiDBLite consensus disorder prediction 1 25 - -
Mal3g4819 1015 Pfam Sec23/Sec24 beta-sandwich domain 662 746 IPR012990 -
Mal3g4819 1015 Gene3D Severin 865 993 IPR029006 -
Mal3g4819 1015 PANTHER SEC24-RELATED PROTEIN 28 1014 - -
Mal3g4819 1015 Pfam Sec23/Sec24 zinc finger 346 383 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mal3g4819 1015 Gene3D Sec23/Sec24 helical domain 746 1012 - -
Mal3g4819 1015 Pfam Sec23/Sec24 trunk domain 420 656 IPR006896 GO:0006886|GO:0006888|GO:0030127
Mal3g4819 1015 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 874 1013 IPR036180 -
Mal3g4819 1015 Pfam Sec23/Sec24 helical domain 757 860 IPR006900 GO:0006886|GO:0006888|GO:0030127
Mal3g4819 1015 MobiDBLite consensus disorder prediction 132 151 - -
Mal3g4819 1015 MobiDBLite consensus disorder prediction 1 161 - -
Mal3g4819 1015 PANTHER OS04G0129500 PROTEIN 28 1014 - -
Mal3g4819 1015 SUPERFAMILY Helical domain of Sec23/24 757 864 IPR036175 GO:0006886|GO:0006888|GO:0030127
Mal3g4819 1015 SUPERFAMILY Zn-finger domain of Sec23/24 338 419 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mal3g4819 1015 Gene3D - 292 404 - -
Mal3g4819 1015 SUPERFAMILY vWA-like 420 660 IPR036465 -
Mal3g4819 1015 MobiDBLite consensus disorder prediction 68 123 - -
Mal3g4819 1015 MobiDBLite consensus disorder prediction 178 202 - -
Mal3g4819 1015 Gene3D - 293 745 - -
Mal3g4819 1015 Gene3D von Willebrand factor, type A domain 422 659 IPR036465 -
Mal3g4819 1015 CDD Sec24-like 420 661 IPR041742 GO:0006886|GO:0006888|GO:0030127
Mal3g4819 1015 SUPERFAMILY beta-sandwich domain of Sec23/24 184 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4819 Mal-Chr3 128208922 128220204 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4819 K14007 - gmx:100791083 1675.6