Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4810 ATGGGGCAAAAGCATTTTGCTGCGGTGTTCTGTTTGTGGGCTTTAACATGTTCCCTGCTTCCTTCTTTCTCCTTTGGAATGATGAGAATTGGATTGCAGAAGAGACCTCTAGATCTTCATAGTATTGATGCTTTTAAAATGGTAAGACAACAACAACTAAGATCAGGAAGACCAATGATGCTTGCACATAAGTCCAGCGATGATGCTATAGTACCTTTGAAGAATTATATGGATGCTCAATATTTCGGTGAGATTGGAATTGGCACGCCCCCACAGACCTTTACTGTCATATTTGATACCGGTAGTTCCAACCTATGGGTTCCATCATCCAAGTGTTACTTTTCTCTTGCCTGCTATACCCATAATTGGTACAAGGCAAAGAAATCCCATACATATAACAAAAACGGAACATCGTGTAAAATAAGCTATGGAACCGGATCAATATCTGGTTACTTCAGTCAAGATAATGTTAAAGTTGGCAGTTCTGTTGTCAAGCATCAGGATTTCATTGAGGCTACTCGAGAAGGAAGTCTTTCTTTTCTGGCAGGAAAGTTTGATGGAATATTCGGACTTGGATTTCAAGAGATCTCAGTTGAAAGAGCTTTGCCAGTATGGTACAATATGATGGAACAAAATCTTATCGGTGAGAAGGTGTTCTCTTTTTGGCTCAATGGGAATCCTAATGCGAAAAAGGGTGGTGAATTAGTTTTTGGTGGTGTTGACCCTAAGCATTTCAAAGGAAAACACACTTATGTCCCGGTTACTGAAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTTACATTGGAGGCTCGTCAACAGGTGTTTGTGAAGGTGGCTGTGCTGCTATTGTGGACTCAGGAACATCTTTGCTTGCTGGTCCAACTCCTGTTGTGGCTGAAATCAACCATGCTATTGGAGCTGAAGGAGTTCTGAGTGTAGAATGTAAAGAAGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCCTAGTATCAGGGGTAAAACCTAGTGACATATGTTCACAAGTTGGTTTATGTTCTGTCCGCAGGGATCAATCTAATAGTGCTAAGATTGAGATGGTGACTGAAAAGGAACAGAGCGAGTTGTCAGCAAAAGATACTCCTTTGTGTTCTTCTTGTCAGATGCTTGTTCTTTGGATCCAGAATCAACTCAAACAAAAGGCAACCAAGGAGAGAGTATTCAACTATGTGAATCAACTGTGTGAGAGTCTTCCAAGTCCATCCGGAGAATCAGTGATAAGCTGTAACGATATTTCTAAGATGCCAAACATTTCATTCACTATCGGAAACAAACCCTTTGTCCTCACACCAGAACAGTATATTCTAAGAACTGGAGAAGGCATTACAGAGGTCTGCCTTAGTGGGTTTATTGCTTTTGATGTTCCTCCTCCAAAGGGTCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGCTTATCACACTGTTTTTGACTACGGAAACCTCCAAGTTGGTTTTGCTGAATCTGCCTAG 1515 0.4106 MGQKHFAAVFCLWALTCSLLPSFSFGMMRIGLQKRPLDLHSIDAFKMVRQQQLRSGRPMMLAHKSSDDAIVPLKNYMDAQYFGEIGIGTPPQTFTVIFDTGSSNLWVPSSKCYFSLACYTHNWYKAKKSHTYNKNGTSCKISYGTGSISGYFSQDNVKVGSSVVKHQDFIEATREGSLSFLAGKFDGIFGLGFQEISVERALPVWYNMMEQNLIGEKVFSFWLNGNPNAKKGGELVFGGVDPKHFKGKHTYVPVTEKGYWQIEMGDFYIGGSSTGVCEGGCAAIVDSGTSLLAGPTPVVAEINHAIGAEGVLSVECKEVVSQYGELIWDLLVSGVKPSDICSQVGLCSVRRDQSNSAKIEMVTEKEQSELSAKDTPLCSSCQMLVLWIQNQLKQKATKERVFNYVNQLCESLPSPSGESVISCNDISKMPNISFTIGNKPFVLTPEQYILRTGEGITEVCLSGFIAFDVPPPKGPLWILGDVFMRAYHTVFDYGNLQVGFAESA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4810 504 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 96 107 IPR001969 GO:0004190|GO:0006508
Mal3g4810 504 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 3 503 IPR001461 GO:0004190|GO:0006508
Mal3g4810 504 PANTHER FUNGAL PROTEINASE A, ASPARTIC PROTEINASE SUPERFAMILY PROTEIN 3 503 - -
Mal3g4810 504 SUPERFAMILY Saposin 312 413 IPR011001 -
Mal3g4810 504 Pfam Saposin-like type B, region 1 376 413 IPR007856 GO:0006629
Mal3g4810 504 Gene3D Acid Proteases 240 504 IPR021109 -
Mal3g4810 504 Pfam Eukaryotic aspartyl protease 80 502 IPR033121 -
Mal3g4810 504 ProSiteProfiles Peptidase family A1 domain profile. 81 501 IPR033121 -
Mal3g4810 504 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 283 294 IPR001969 GO:0004190|GO:0006508
Mal3g4810 504 Gene3D Acid Proteases 28 239 IPR021109 -
Mal3g4810 504 Gene3D - 311 413 - -
Mal3g4810 504 SUPERFAMILY Acid proteases 17 502 IPR021109 -
Mal3g4810 504 CDD phytepsin 71 502 IPR033869 GO:0004190
Mal3g4810 504 ProSiteProfiles Saposin B type domain profile. 311 351 IPR008139 -
Mal3g4810 504 PRINTS Pepsin (A1) aspartic protease family signature 477 492 IPR001461 GO:0004190|GO:0006508
Mal3g4810 504 PRINTS Pepsin (A1) aspartic protease family signature 233 246 IPR001461 GO:0004190|GO:0006508
Mal3g4810 504 PRINTS Pepsin (A1) aspartic protease family signature 87 107 IPR001461 GO:0004190|GO:0006508
Mal3g4810 504 PRINTS Pepsin (A1) aspartic protease family signature 283 294 IPR001461 GO:0004190|GO:0006508
Mal3g4810 504 SMART sapb_4 275 347 IPR008139 -
Mal3g4810 504 ProSiteProfiles Saposin B type domain profile. 374 415 IPR008139 -
Mal3g4810 504 Pfam Saposin-like type B, region 2 315 347 IPR008138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4810 Mal-Chr3 128094933 128098210 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4810 K08245 - gmx:548009 907.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4810 3 128094933 128098210 Mal3g4810 3 128094933 128098210 ECH
Mal3g4810 3 128094933 128098210 Mal1g1545 1 20073914 20077417 PCT