Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4757 ATGGCGGGGACTGAAGAAAACAAAAAACAATCCGCTTCAAAACCACAAAAACAACCTAAACAACCTAAACCACAACAATCAGGTGGTGGAAAGAAGAAGGAAGTGAAGAAAGAGACTGGATTAGGTCTCACCAATAAGAAGGCTGATAACTTCGGAGAGTGGTATTCCGAGGTTGTTGTTAATGGTGAAATGATTGAGTACTATGATATTTCTGGTTGCTACATTCTCAGACCTTGGTCAATGGCTATTTGGGAGATTATGCAAGCTTTTTTTGATCCAGAAATAAAGAAAATGAAGATCAAGAACTGCTACTTCCCTTTGTTCGTTTCTAATACTGTTCTGGAAAAGGAGAAGGACCATATTGAGGGTTTCGCTCCAGAGGTTGCTTGGGTGACAAAATCTGGACAATCTGATTTAGAGATTCCTATTGCTATTCGTCCAACTAGTGAAACTGTTATGTATCCTTACTACTCTAAGTGGATAAGGGGACATCGTGACTTGCCTTTGAAACTTAATCAGTGGTGCAATGTTGTTAGATGGGAGTTCAGCAATCCCACACCATTCATCAGGAGTCGTGAGTTTCTTTGGCAAGAAGGGCACACCGCTTTTGCAACAAAGGAGGAAGCAGATACAGAGGTTCTTGAGATTTTGGAATTATATCGGCGTATATACGAAGAGTATTTGGCAGTTCCTGTCATAAAGGGTAAGAAAAGTGAGCTTGAGAAGTTTGCTGGTGGACTTTACACTACCAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGCATACAAGGTGCAACATCTCATTGTTTGGGACAAAATTTTGCCAAGATGTTTGAGATAAACTATGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGTACTCGAACTATTGGGGTGATGGTGATGGTTCATGGTGATGACAAGGGATTGGTGCTGCCTCCTAAAGTAGCTTCAGTTCAAGTCATTGTGATTCCTGTGCCTTACAAAGATGCCGATACTCAAGGAATCTTTGATGCCTGTACCGCAACTGTGAATATGTTGTTGGAAGCAGGAATTCGTGCTGAGTCAGATGCTAGAGATAACTATTCTCCTGGATGGAAGTATTCTCAGTGGGAAATGAAAGGTGTTCCTCTAAGGATTGAAATTGGGCCCAAGGACTTAGCAAATAAGCAGGTTCGTGCTGTTCGTCGTGATAGCGGAGCAAAGATCGACATTGCTAATGATGATTTGGTTGAGGAAATAAAGAAGTTGCTCGATAATATTCAACAGAATTTGTTCAATGTTGCAAAACAAAAGCGAGATGAATGTATTCAGGTCATACATACATGGGATGAGTTTGTTGAAGCTTTGAATGAAAAAAAGATGATCTTAGCTCCTTGGTGTGACGAGGAGGAGGTGGAAAAAGATGTCAAAGCAAGGACAAAGGGTGAGACAGGAGCTGCAAAGACACTCTGTAGTCCCTTTGATCAGCCAGAACTCCCCGAAGGTACGGTGTGCTTTGCGTCAGGCAAGCCTGCAAAGAAGTGGTCATACTGGGGCAAAAGTTACTAG 1575 0.421 MAGTEENKKQSASKPQKQPKQPKPQQSGGGKKKEVKKETGLGLTNKKADNFGEWYSEVVVNGEMIEYYDISGCYILRPWSMAIWEIMQAFFDPEIKKMKIKNCYFPLFVSNTVLEKEKDHIEGFAPEVAWVTKSGQSDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLKLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADTEVLEILELYRRIYEEYLAVPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINYENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGIFDACTATVNMLLEAGIRAESDARDNYSPGWKYSQWEMKGVPLRIEIGPKDLANKQVRAVRRDSGAKIDIANDDLVEEIKKLLDNIQQNLFNVAKQKRDECIQVIHTWDEFVEALNEKKMILAPWCDEEEVEKDVKARTKGETGAAKTLCSPFDQPELPEGTVCFASGKPAKKWSYWGKSY* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4757 524 Coils Coil 419 439 - -
Mal3g4757 524 Pfam Anticodon binding domain 328 424 IPR004154 -
Mal3g4757 524 Gene3D - 322 442 IPR036621 -
Mal3g4757 524 Hamap Proline--tRNA ligase [proS]. 44 524 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 MobiDBLite consensus disorder prediction 1 25 - -
Mal3g4757 524 PANTHER PROLINE--TRNA LIGASE, CYTOPLASMIC-LIKE 17 524 - -
Mal3g4757 524 PANTHER PROLYL-TRNA SYNTHETASE 17 524 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 TIGRFAM proS_fam_I: proline--tRNA ligase 45 524 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 CDD ProRS_core_arch_euk 50 311 IPR033721 -
Mal3g4757 524 PRINTS Prolyl-tRNA synthetase signature 183 194 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 PRINTS Prolyl-tRNA synthetase signature 102 120 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 PRINTS Prolyl-tRNA synthetase signature 173 181 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 PRINTS Prolyl-tRNA synthetase signature 143 154 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 Gene3D Bira Bifunctional Protein; Domain 2 44 321 IPR045864 -
Mal3g4757 524 Gene3D - 445 524 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 144 309 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Mal3g4757 524 Pfam Prolyl-tRNA synthetase, C-terminal 451 524 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 SUPERFAMILY C-terminal domain of ProRS 447 524 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 SMART ProRS_C_1_2 451 524 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Mal3g4757 524 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 83 321 IPR006195 -
Mal3g4757 524 SUPERFAMILY Class II aaRS and biotin synthetases 49 315 IPR045864 -
Mal3g4757 524 MobiDBLite consensus disorder prediction 1 39 - -
Mal3g4757 524 CDD ProRS_anticodon_zinc 317 524 - -
Mal3g4757 524 SUPERFAMILY Class II aaRS ABD-related 316 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4757 Mal-Chr3 127573835 127578676 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4757 K01881 - gmx:100782067 957.207