Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4756 ATGGCTAATAACCCAACACAACCTAATGTTGGGTTCATCCCTTCAAACCCAGAACAAAAACAGACTCCAATTCCAATTCATCCTCCTCCTCCTCCTCCTTCAACTAGTAGTATTTTAGCACCACCTAGATTTCCTCCACCCATATTACAATTACAGAAAGATCAAGCTGCCAATGGTGCTGTTGCAACTGGCAGTCCAGTTCCTCACTTGAGCACCCCTCCTGGACCTCCTGTCTTTACATCACCTGTCCGTCCAGCTGCCGTTCCTTTTCGAACTTCACCCGCATCGCCTCAGCCGCCTGCACTTTCTTCAGCATCTTCTTTGCCAACGTCATCGCCGCCTCATTACTCAAATGGATCATTTGACTTACAACCACAAGTTTCTGGTGGCATAGAGGATAATATTCCAATTGGAGAGTCATCCTTTGTACTTTTTTCAGCTCATAAGGTATTGAAGCAGAAGAAACAAGCTAATGTACCCAGTTTGGGGTTTGGGGCGTTGGTCTCTCCTGGGAGGGAGGTCACAACCGGCCCCCAGGTAGTACAGCGTGATCCCCATCGCTGTCAAAGCTGTGGGGCATATGCAAATAGATATTGCAACATATTGCTTGGATCAGGCCAGTGGCAGTGTGTTATATGTCGAAAATTGAATGGAAGTGATGGTGAGTACATTGCCCATAGCAAGGAAGATCTTCACAGATTTCCAGAACTCTCTTCACCAATGGTTGACTTTGTTCAAACTGGGACCAAGAGACCTGGTTTTGTTCCAGTTTCAGATTCCAGAATGTCTGCACCAGTAGTTCTTGTAATAGATGAATGTTTAGATGAACCTCACTTACAGCATCTTCAGAGCTCTTTGCATGCATTTGTTGATTCTCTCCCTCCAACAACAAGATTAGGAATTATATTATATGGCCGTACTGTGTCAGTGTATGACTTTTTAGAAGAATCAGTTGCATCTGCTGATGTGCTTTCCGGGGACAAGTCGCCAAGTGAAGATTCTTTGAAAGCTTTGCTTTATGGTACCGGTATATATTTGTCACCAATGCATGCTTCACTGGCTGTAGCGCATTCCATATTTTCATCATTGACCCCGTATAAGTTGAACGTACCAGAAGCTTCCAGAGATCGGTGCCTAGGAACTGCCGTTGAGGTCGCTCTGGCTATAATTCAGGGCCCATCTGCTGATCTGTCTCGAGGGGTTGTCAAAAGATCAGGGGGCAATAGTAGAATTATTGTCTGTGCCGGTGGACCAAACACTTATGGGCCTGGATCTGTTCCTCATTCTTTTAACCACCCTAATTATCCGTATATGGAAAAGACAGCATTGAAATGGATGGAGAATTTAGGCCGCGAGGCTCATCGACACAATATTTTGGTTGATATATTATGTGCTGGAACATGCCCTGTAAGAGTTCCTATCTTACATCCTCTTGCAAAAGCATCAGGTGGAGTTTTGGTTCTTCATGATGATTTTGGAGAAGCCTTTGGCGTTAATTTACAAAGGGCATCTGCCAGATCGGCAGGCTCCCATGGATTGTTAGAATTGCGCACATCAGACGATATTCTCATCACTCAAGTTGTGGGTCCGGGGGAAGAGTCACATGTAGACACCCATGAAACATTTAAAAACGACACCGCTCTTTATATTCAAATGCTAAGTGTTGAAGAGACACAAAGCTTCGCTCTCTCTATGGAAACCAAAGGAGACATCAAAAGCGATTTTGTCTTTTTCCAGTTTGCAATTCAGTATTCAAATGTGTATCAGGCTGATGTCTCAAGGGTCGTTACTGTTAGGTTGCCAACAGTAGATAGTGTTTCAGGATATCTTGAGAGTGTTCAGGATGAAGTGGCTGCTGTCCTCATTGCAAAGAGAACTCTGTTACGAGCCAAGAACCATTCAGTTGCTGTTGATATGCGGGCAACAATAGATGAAAGAATCAAGGATATTGGTCTAAAATTTGGCTCCCAATTACCCAAATCAAAACTTCGTTGCTTCCCAAAGGAGCTTTCTCTCTTACCGGAGCTCCTTTTCCATCTCAGGAGAGGGCCACTATTGGGATGCATTATTGGCCATGAAGATGAGAGGTCCGTGCTGAGGAACCTGTTTCTAAATGCATCTTTTGATCTATCTCTCAGAATGGTGGCTCCTCGTTGTCTAATGCACAGGGAGGGGGGAACTTTTGAGGAGCTACCGGCTTATGATCTTGCCATGCAGTCTGATACTGCTGTTGTACTTGACCATGGCACTGATGTCTTCATTTGGCTGGGTGCTGAACTTGTAGCCGATGAAGGAAAAAGTGCTTCTGCTTTGGCTGCATGCAGGACATTGGCTGAAGAGCTGACCGAGTTCCGTTTTCCAGCTCCTCGTATCCTTGCATTCAAGGAGGGTAGCTCGCAGGCTCGATATTTTGTCTCTCGTCTCATACCAGCTCACAAGGATCCTCCTTATGAGCAGGAGGCAAGGTTCCCACAACTTAGGACATTAACATCAGAACAGAGAACAAAGCTGAAAAGCAGTTTTGTTCACTTCGACGATCCAAGTTTCTGTGAATGGATGCGAAGTTTGAAGGTCGTACCACCTCAACCTAGTTGA 2595 0.4505 MANNPTQPNVGFIPSNPEQKQTPIPIHPPPPPPSTSSILAPPRFPPPILQLQKDQAANGAVATGSPVPHLSTPPGPPVFTSPVRPAAVPFRTSPASPQPPALSSASSLPTSSPPHYSNGSFDLQPQVSGGIEDNIPIGESSFVLFSAHKVLKQKKQANVPSLGFGALVSPGREVTTGPQVVQRDPHRCQSCGAYANRYCNILLGSGQWQCVICRKLNGSDGEYIAHSKEDLHRFPELSSPMVDFVQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILYGRTVSVYDFLEESVASADVLSGDKSPSEDSLKALLYGTGIYLSPMHASLAVAHSIFSSLTPYKLNVPEASRDRCLGTAVEVALAIIQGPSADLSRGVVKRSGGNSRIIVCAGGPNTYGPGSVPHSFNHPNYPYMEKTALKWMENLGREAHRHNILVDILCAGTCPVRVPILHPLAKASGGVLVLHDDFGEAFGVNLQRASARSAGSHGLLELRTSDDILITQVVGPGEESHVDTHETFKNDTALYIQMLSVEETQSFALSMETKGDIKSDFVFFQFAIQYSNVYQADVSRVVTVRLPTVDSVSGYLESVQDEVAAVLIAKRTLLRAKNHSVAVDMRATIDERIKDIGLKFGSQLPKSKLRCFPKELSLLPELLFHLRRGPLLGCIIGHEDERSVLRNLFLNASFDLSLRMVAPRCLMHREGGTFEELPAYDLAMQSDTAVVLDHGTDVFIWLGAELVADEGKSASALAACRTLAEELTEFRFPAPRILAFKEGSSQARYFVSRLIPAHKDPPYEQEARFPQLRTLTSEQRTKLKSSFVHFDDPSFCEWMRSLKVVPPQPS* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4756 864 Gene3D Severin 731 828 IPR029006 -
Mal3g4756 864 SUPERFAMILY Zn-finger domain of Sec23/24 176 247 IPR036174 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mal3g4756 864 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g4756 864 Gene3D Sec23/Sec24 helical domain 604 723 - -
Mal3g4756 864 MobiDBLite consensus disorder prediction 69 83 - -
Mal3g4756 864 CDD trunk_domain 259 502 - -
Mal3g4756 864 Gene3D von Willebrand factor, type A domain 265 510 IPR036465 -
Mal3g4756 864 SUPERFAMILY Helical domain of Sec23/24 615 715 IPR036175 GO:0006886|GO:0006888|GO:0030127
Mal3g4756 864 Pfam Sec23/Sec24 beta-sandwich domain 511 602 IPR012990 -
Mal3g4756 864 MobiDBLite consensus disorder prediction 21 48 - -
Mal3g4756 864 SUPERFAMILY beta-sandwich domain of Sec23/24 14 613 - -
Mal3g4756 864 Pfam Sec23/Sec24 helical domain 616 712 IPR006900 GO:0006886|GO:0006888|GO:0030127
Mal3g4756 864 Pfam Sec23/Sec24 zinc finger 185 223 IPR006895 GO:0006886|GO:0006888|GO:0008270|GO:0030127
Mal3g4756 864 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 717 857 IPR036180 -
Mal3g4756 864 CDD gelsolin_like 717 808 - -
Mal3g4756 864 MobiDBLite consensus disorder prediction 97 127 - -
Mal3g4756 864 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 53 864 IPR037364 -
Mal3g4756 864 MobiDBLite consensus disorder prediction 1 127 - -
Mal3g4756 864 Pfam Sec23/Sec24 trunk domain 267 493 IPR006896 GO:0006886|GO:0006888|GO:0030127
Mal3g4756 864 Gene3D - 174 238 - -
Mal3g4756 864 PANTHER PROTEIN TRANSPORT PROTEIN SEC23 53 864 - -
Mal3g4756 864 SUPERFAMILY vWA-like 266 498 IPR036465 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4756 - - gmx:100781518 1507.66