Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4689 ATGTCTCGTCGCAATAGCAATGGTCGATCACCCCTCGTAAATCCACAGCGTCAAATTACTTCCTTCTTCACCAAATCCACTTCTCCCCTTTCATCTTCCCCTTCTCCCTCTCTCTCCAAAACCCTAAAATCAAACCCTAATCCCATTCCTAAACCTAACCCTAACCCTAACCCCAGTCCTACCCTCACCACACCTTCACCACTCAATCCCAAAAAACCAAATAAACCCCGTCTCGTCATCGACGCTCCTCCTACAACGACACCGCCTCCTTCGCATTCTTCTTTCATTGGTAAACGAATCAAGGTTTATTGGCCTTTAGACGATGCTTGGTACGAAGGTACTGTCAAATCGTTTGATAGTGTTACTTCTAAGCATCGGATTCGTTATGATGATGATGAAGAGGAATGTATTGATATTTCCAAGGAGAAGATTGAGTGGATTCAGGATTCTTCTTCGAAGAAGCTTAAACGGTTGCGTCGCGGTTCTTCTCCTATTAGAAAGATGGTGATTGATGATAATGAGGTGGAAGAAAGTCCCAAAGAAGAAAAAAAAGAAGAAGAAGAAGATGATGCTGATAATGATGATTCCGAAGATGAAGATTGGGGGAAGAATGCTGTACTGGAGGATGTTGTGGATGACGAAGAAGACGATATAGAGCTCGAGGAAGAAAATGAAGTTATAGAGAGTGCTAAAGGAAAGAGTAGTGGCAAGGTTGAACCCAAAAAGCGGAAACTCGGTGGAGCGGCGAAATTGGAGCCCGTGAAAAAGAGCAAGAGTGGAATGGAAGTTAATACTAATAGGGTAGCTGTTAAGCTCTCACCATTGGTGCCTGTGAATAATTTGGAGGTTAAAAAGACATCTGATGGCGCAGACAGTGTTACAACTGGTGATGCTTCTGAAAGATTTGCGCTCCGCGAAGCTCAGAAGTTTCACTTTCTAGGAAAAGATCGCAGGGATGCCAAACGAAGGCGTCCAGGAGATGAAAATTATGACTCAAGAACCCTCTACTTGCCTCCAGATTTTGTGAGGAATTTGTCAGGTGGCCAGAAACAATGGTGGGAATTCAAGTCAAAACACATGGACAAAGTTTTGTTTTTCAAGATGGGTAAATTTTATGAGCTTTTTGAAATGGATGCACATGTGGGAGCAAAAGAGCTTGACTTGCAGTATATGAAGGGAGAGCAACCTCATTGTGGTTTTCCAGAGAAGAATTTCTCAGTGAATGTAGAGAGACTAGCTAGAAAGGGTTATCGAGTTCTTGTTGTAGAGCAGACTGAAACACCTGAACAGATGGAGCTTCGTCGCAAGGAGAGCGGCTCTAAAGATAAGGTTGTGAGACGGGAAATATGTGCTGTGGTTTCAAAAGGCACATTAATAGATGGGGAGTTTATGTCAACAAATCCTGAAGCTGCATATTTAATGGCACTGACTGAGTGCCATGAGAACAATCCAAATGAAATGTCGGAGCGCACCTACGGTGTTTGTGTAGTTGATGTCGCCACAAGCAGAGTCATTCTTGGGCAGTTCAACGATGACGCAGAGTGCAGTGCCTTGTGCTCTATCTTGTCTGAGATCAGGCCAGTTGAAATTGTGAAACCTGCTAAACTACTCAGTGCTGAAACAGAAAGGGTACTGCTGAAACACACCAGAAACCCTCTAGTGAATGAGTTAATTCCAAATGTGGAATTCTGGGATGCTGATAAAACTTTGGATCAATTGAAGAGAATTTATGGGCACAATAATGATGCTAGTGCTCAAGATGGTGGGTTAGATTGTCTGCCAGATGTTTTACTGGAGCTGGTGAAAACAGGCCTTGACAGCAGGAGTGCACTCTCAGCACTTGGTGGTGCTCTCTCTTATTTGAAACAGGCTTTCCTAGATGAGCAGTTGCTTAGATTTGCGCAGTTTGAGTTGCTTCCATGTTCTGTTTTCAGTGGTCTTGCTTCAAAACCATACATGGTTCTTGATGCTGTAGCCCTAGAGAATCTCGAGATATTTGAGAATAGCAGAAATGGAGAGTCTTCAGGCACGCTCTATTCTCAATTAAACCAATGTGTTACGGCATTTGGGAAGAGACTGCTCAAGTCATGGCTTGCAAGACCGTTATGTCAAGTGGAGTCAATAAAGGAACGCCAGGAAGCTGTTGCAGGTTTAAAGGGAGTAAATCTACCTCACACGCTAGAATTTCGAAAAGCATTATCAAAGTTACCTGACATGGAGCGGTTGCTGGCACGGGTGTTCTCTTCTAGGGATGCTAGTGGAAGGAATGCCAATAAAGTGGTTCTGTATGAGGATTCATCAAAGAAACAACTGCAAGAGTTTATTTCAGCCCTGCGCGGTCTTGAACTAATGGCACAAGCTTGCTTGTTACTTAGTGTCATTTTGAATGATGTCAAATCTAGACAACTTAGTCATCTTTTAACACCTGGTAAAGGTCTTCCTGATGTAAGTATGGAACTTACTCATTTCAAAGATGCCTTTGATTGGGTGGAAGCTAATAGCTCCGGCCGTATAGTACCTCATGAAGGAGTTGACATAGAATATGATTCAGCTTGTAAGTCAGTTAAAGAGATTGAGTCCAGTTTATTAAAGCATCTCAAGGAACAAAGGAAATTACTTGGAAGCACATCAATCTCTTATGTTGATATTGGAAAGGACACATACCTATTGGAAGTGCCTGAAGATTTGTCTCAGAATATTCCTCAGGATTATGAGAGGCGTTCATCCAAGAAAGGCTTTGTTAGGTACTGGACTCCAGATATTAAAATATTTTTGAAAGAGCTCTCCCATGCGGAAGCTGAAAGGGATACCTTATTGAAAAGTACATTGCAGAGAATGATTGGGCGTTTTTGTGAACATCACACTCAGTGGAAGCAGTTGGTGTCTGCAACTGCTGAGTTGGATGTTTTGATCAATTTAGCTATTGCCAGTGATTACTATGAAGGACCAACATGCAGACCAAGTTTTGTTGGGAACTTATGTACAAATGAAGCTCCCTACATCTATGCTAAAAGTCTGGGACACCCAGTTCTTAGGAGTGATTCCTTAGGAAAGAGTGCCTTTGTACCTAATGACGTAACCATAGGTGGTCCAGACCAGGCCTCCTTTATTCTTCTTACAGGTCCTAACATGGGTGGGAAGTCAACTCTTCTTCGCCAAGTTTGCTTGGCTGTGATTTTGGCCCAGGTAGGGGCTGACGTCCCTGCAGAAAGTTTTGAATTGTCTCCTGTGGACCGAATTTTTGTTCGGATGGGTGCCAGAGATAATATCATGGCTGGCCAAAGTACATTTTTAACCGAGCTTTCAGAAACTGCAACAATGTTGGCATCAGCCACTCGTAATTCATTGGTGGCTCTGGATGAGCTTGGGCGTGGGACCTCAACGTCTGATGGACAAGCCATTGCGGAATCGGTATTAGAACATCTTATACGTAACGTGCAGTGTCGTGGATTATTTTCTACACACTATCATCGATTAGCTATAGATTATCTCAAAGATCCCAAGGTCTGTCTCTCTCACATGGCATGCCAAGTTGGTAGTGGAAATGAAGGTTTGGACGAAGTCACCTTTCTTTACAGGCTGACCGCTGGTGCTTGCCCGAAGAGCTACGGTGTTAATGTTGCCCGGTTAGCTGGACTACCTACTTCTGTGCTTCAGAAGGCTGATGCCAAGTCCAGAGAATTTGAGGCCACATATGGTAAATACAGAAAGGTGTCTTCCAATCAAAGTTGGGTTGATGAGATAATAGTCTTAGTACAAAAATTGAACAATGCTGCTATGAATTTTAGTTGCGAGGAGACTGTTTCCGATCACTCTCTAGCGAAGCTTCAGGGTGAAGCAAGAAAACTGCTAGAACGATGTTAA 3864 0.4319 MSRRNSNGRSPLVNPQRQITSFFTKSTSPLSSSPSPSLSKTLKSNPNPIPKPNPNPNPSPTLTTPSPLNPKKPNKPRLVIDAPPTTTPPPSHSSFIGKRIKVYWPLDDAWYEGTVKSFDSVTSKHRIRYDDDEEECIDISKEKIEWIQDSSSKKLKRLRRGSSPIRKMVIDDNEVEESPKEEKKEEEEDDADNDDSEDEDWGKNAVLEDVVDDEEDDIELEEENEVIESAKGKSSGKVEPKKRKLGGAAKLEPVKKSKSGMEVNTNRVAVKLSPLVPVNNLEVKKTSDGADSVTTGDASERFALREAQKFHFLGKDRRDAKRRRPGDENYDSRTLYLPPDFVRNLSGGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELDLQYMKGEQPHCGFPEKNFSVNVERLARKGYRVLVVEQTETPEQMELRRKESGSKDKVVRREICAVVSKGTLIDGEFMSTNPEAAYLMALTECHENNPNEMSERTYGVCVVDVATSRVILGQFNDDAECSALCSILSEIRPVEIVKPAKLLSAETERVLLKHTRNPLVNELIPNVEFWDADKTLDQLKRIYGHNNDASAQDGGLDCLPDVLLELVKTGLDSRSALSALGGALSYLKQAFLDEQLLRFAQFELLPCSVFSGLASKPYMVLDAVALENLEIFENSRNGESSGTLYSQLNQCVTAFGKRLLKSWLARPLCQVESIKERQEAVAGLKGVNLPHTLEFRKALSKLPDMERLLARVFSSRDASGRNANKVVLYEDSSKKQLQEFISALRGLELMAQACLLLSVILNDVKSRQLSHLLTPGKGLPDVSMELTHFKDAFDWVEANSSGRIVPHEGVDIEYDSACKSVKEIESSLLKHLKEQRKLLGSTSISYVDIGKDTYLLEVPEDLSQNIPQDYERRSSKKGFVRYWTPDIKIFLKELSHAEAERDTLLKSTLQRMIGRFCEHHTQWKQLVSATAELDVLINLAIASDYYEGPTCRPSFVGNLCTNEAPYIYAKSLGHPVLRSDSLGKSAFVPNDVTIGGPDQASFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLASATRNSLVALDELGRGTSTSDGQAIAESVLEHLIRNVQCRGLFSTHYHRLAIDYLKDPKVCLSHMACQVGSGNEGLDEVTFLYRLTAGACPKSYGVNVARLAGLPTSVLQKADAKSREFEATYGKYRKVSSNQSWVDEIIVLVQKLNNAAMNFSCEETVSDHSLAKLQGEARKLLERC* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4689 1287 MobiDBLite consensus disorder prediction 151 245 - -
Mal3g4689 1287 MobiDBLite consensus disorder prediction 164 180 - -
Mal3g4689 1287 MobiDBLite consensus disorder prediction 47 72 - -
Mal3g4689 1287 Gene3D MutS, connector domain 470 650 IPR036678 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 MobiDBLite consensus disorder prediction 1 97 - -
Mal3g4689 1287 Pfam MutS domain II 472 626 IPR007860 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 MobiDBLite consensus disorder prediction 225 245 - -
Mal3g4689 1287 Pfam MutS domain I 348 461 IPR007695 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 Coils Coil 204 224 - -
Mal3g4689 1287 MobiDBLite consensus disorder prediction 1 46 - -
Mal3g4689 1287 Pfam MutS domain V 1038 1228 IPR000432 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 Pfam MutS family domain IV 843 933 IPR007861 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 Gene3D DNA repair protein MutS, domain I 304 465 IPR016151 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 997 1229 IPR027417 -
Mal3g4689 1287 Gene3D - 819 950 - -
Mal3g4689 1287 SMART DNAend 673 1014 IPR007696 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 SUPERFAMILY DNA repair protein MutS, domain I 334 457 IPR016151 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 MobiDBLite consensus disorder prediction 181 202 - -
Mal3g4689 1287 Pfam MutS domain III 659 974 IPR007696 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 SUPERFAMILY DNA repair protein MutS, domain III 656 980 IPR036187 -
Mal3g4689 1287 SUPERFAMILY Tudor/PWWP/MBT 94 136 - -
Mal3g4689 1287 SUPERFAMILY DNA repair protein MutS, domain II 466 668 IPR036678 GO:0005524|GO:0006298|GO:0030983
Mal3g4689 1287 MobiDBLite consensus disorder prediction 209 224 - -
Mal3g4689 1287 Gene3D - 985 1261 IPR027417 -
Mal3g4689 1287 Gene3D - 653 974 - -
Mal3g4689 1287 PANTHER DNA MISMATCH REPAIR PROTEIN MSH6 242 1257 - -
Mal3g4689 1287 PIRSF Msh6 1 1275 IPR017261 GO:0006298|GO:0030983
Mal3g4689 1287 Gene3D - 89 145 - -
Mal3g4689 1287 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 242 1257 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
Mal3g4689 1287 SMART mutATP5 1034 1226 IPR000432 GO:0005524|GO:0006298|GO:0030983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4689 Mal-Chr3 126728670 126736783 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4689 K08737 - gmx:100811104 1878.6