Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4670 ATGGTGAACACATCTTCTTCTCCGGTGAAGATCACAGTCTCTTCAGGAGGCAAAACTGGTGGAAGTAGAAACATGGGACTAACAAGTCCAATACCACGTTCTTCAGTCTCTAACAACAACAATTCACCTCTCAGCAACCTATCAAACCGTCTTTCCGGCGGCGGAGCCGCCATAAGAAGGTTATCAGGTGGTGGAGGTGGTAACTATTCATCCATGTCCAAAGATGATGTTACAGAAGACACAACAACATCGGAATATGTTTCATACACAGTTCATATTCCTCCAACACCAGATCGCATGCCACTTTCATCTTCACAAACAAGCCTTCCTGAAGAAAACAACAAAAACAACAACAGTTTCATCTCAGGTACTATTTTTACCGGAGGTTTTAACTCTGTTACACGAGGCCATGTCATCGAATGCTCTAACGATCGTGAAGATGGACCGTTGAAATCTAAACTGATGTGTGGAATGAAAGGCTGTGATGAGGAAGCGATCAAGGGTTGTACATGTGAGTGTGGTTTCAAGATTTGTAGGGATTGTTATAAAGAAATTTGTGGAAACGGTGGTGGTGGTAAATGTCCAGGTTGTAAAGATTCTTACAACACTGTTAGTGATGGTGAAGAAGAAGAAGAGGTTTCTGAGTCTGAAGATCAAGCTCAACCGTTACCTTCTATGGCTGAATTCAAGTTGGATAAGAGGCTTTCTGTTGTGAAATCGTTTAAAGCTCAGAATCATCCACCTGATTTTGATCATACTCGGTGGTTATTTGAAACTAAAGGAACTTATGGTTATGGAAATGCTGTTTGGCCTAAAGATGGATTTGGTTCCAATGGTTATGAACCCCCTCCTGATTTTGGAAAGAAATCTAGAAGACCCTTGACAAGAAAAGTTGGGGTTTCTGCTGCAATTCTCAGTCCTTATAGGTTGCTTATTCTGATGCGTCTTGCTGCACTTGGTTTATTTCTTACATGGAGGATTCGACACCGAAACCATGAGGCAATGTGGTTGTGGGGAATGTCAGTGACTTGTGAGCTATGGTTCGCATTTTCATGGCTTCTTGATCAGCTTCCTAAGCTGTGTCCAGTGAACAGAGTTACAGATTTGTCTGTTTTGAAAGAACGGTTTGAGTCACCGAATCTGCGAAACCCTAAAGGAAGGTCTGATCTACCTGGAATTGATGTCTTTGTTTCAACTGCAGATCCAGAAAAGGAGCCACCTCTTGTAACTGCAAACACCATTTTATCTATCCTTGCAGTTGATTATCCTGTGGAAAAAGTTGCTTGTTATTTGTCTGATGATGGTGGAGCTCTTTTGACATTTGAAGCTCTTGCTGAGACTGCTAGTTTTGCAAGAGTTTGGGTTCCTTTTTGTAGAAAACACCAAATTGAGCCAAGAAATCCTGAAGCTTATTTTGGTCAGAAGCGCGATTTTCTCAAGAACAAGGTTCGGTTGGACTTTGTTAGGGAGAGGAGAAGGGTGAAGAGGGAATATGATGAATTCAAAGTCAGGATCAATTCCTTACCTGAATCTATAAGGAGAAGATCAGATGCTTACAATGCTCATGAGGAGTTGAGAGCCAAGAAGAAACAGATGGAAACCGGTTCCGATGTATCCGAACTCCTTAAGGTTCCTAAAGCAACTTGGATGTCTGATGGTTCTCTTTGGCCTGGAACTTGGTCATCAGCAGAACCTGACCACTCTAGAGGTGACCATGCTGGTATAATTCAGGCAATGTTGGCTCCACCAAATGTAGAACCAGAATATGGTTCAGAAGCTGATGGAGAGAACTTGATTGACACAACAGATGTTGATGTTAGGTTGCCAATGCTTGTTTATGTGTCTCGTGAGAAGAGGCCGGGATATGATCACAACAAGAAAGCGGGTGCCATGAATGCTCTTGTTCGAACTAGTGCTGTCATGTCCAATGGACCATTTGTTCTCAATCTTGATTGTGATCATTACATCTACAACTCCTTGGCCTTAAGGGAAGGTATGTGCTTTATGCTTGATAGAGGTGGTGATAGGATATGTTATGTTCAATTCCCTCAAAGGTTTGAAGGCATTGACCCCAGCGATCGATATGCCAACCACAACACAGTGTTCTTTGATGTGAGCATGAGAGCTCTTGATGGTTTACAAGGTCCTATGTATGTTGGAACTGGTTGCATTTTCAGGAGAACTGCTCTGTATGGTTTTAGTCCTCCTAGAGCCTCTGAACATCATGGGTGGTTTGGCAGGAGGAAAATTAAGCTGTTTCTGAGAAAATCAAAGGTGTCAAAAAAGCAAGAAGATGAAGTTTCTGTGCCAATCAATGATCACAATGACGACGATGCAGATATTGAGTCCTTGCTTCTTCCCAAAAGATTTGGAAATTCTTCTTATCTAGCTGCATCCATTCCAGTTGCAGAATACCAAGGAAGGTTGCTACAAGATTCAAAAGGAAATGGAACACAGGGAAGGCCTGCAGGTTCTCTTGCCGTGCCTCGCGAACCATTAGATGCTGCTACCGTTGCAGAGGCAATTAGTGTAATATCTTGTTACTATGAGGATAAAACTGAGTGGGGGAAAAGAGTAGGGTGGATATATGGTTCAGTTACAGAAGATGTTGTTACTGGTTACAGAATGCACAATAGAGGGTGGAGATCAGTGTACTGTGTGACCAAAAGAGATGCTTTTAGAGGAACAGCTCCAATCAATTTAACAGACAGGCTCCACCAAGTGCTTCGTTGGGCGACAGGGTCGGTTGAAATCTTCTTCTCAAGGAACAACGCGTTATTAGCAAGTCCTAGAATGAAGTTCTTGCAAAGGGTAGCATATTTCAATGTTGGAATGTACCCTTTCACTTCAATGTTTCTGATTGTGTACTGCTTTCTACCTGCATTGTCCTTATTCTCAGGACAGTTCATAGTCCAATCACTGAGTGTAACATTTCTAGTGTTCTTGCTTGGAATTACAGTCACACTATGCTTGCTTGCATTACTTGAGATCAAGTGGTCAGGAATCACTCTACATGATTGGTGGAGAAATGAACAGTTTTGGTTAATCGGCGGAACGAGTGCACATCCTGCAGCTGTTTTACAAGGGTTGTTGAAGGTGATAGCAGGAGTAGACATCTCATTCACATTGACATCAAAATCAGCTACACCAGAAGATGGAGAAGATGAGTTTGCTGATCTTTATGTAGTGAAATGGAGTTTTCTAATGGTTCCTCCAATCACAATCATGATGGTGAACACTATTGCTATTGCTGTTGGAGTAGCTAGGACTCTATATAGTCCATTTCCACAATGGAGTAGACTTGTTGGAGGGTTGTTTTTCAGCTTCTGGGTTTTGTGTCATCTTTATCCATTTGCAAAAGGACTTATGGGAAGGAGAGGAAAGGTTCCAACCATTATCTATGTTTGGTCAGGATTACTCTCAATCATTATTTCTATGCTTTGGGTTTATGTTAACCCTCCTTCTGGTGCAAGACCACAAGATTACATGAATTTTCAGTTTCCTTAG 3507 0.4197 MVNTSSSPVKITVSSGGKTGGSRNMGLTSPIPRSSVSNNNNSPLSNLSNRLSGGGAAIRRLSGGGGGNYSSMSKDDVTEDTTTSEYVSYTVHIPPTPDRMPLSSSQTSLPEENNKNNNSFISGTIFTGGFNSVTRGHVIECSNDREDGPLKSKLMCGMKGCDEEAIKGCTCECGFKICRDCYKEICGNGGGGKCPGCKDSYNTVSDGEEEEEVSESEDQAQPLPSMAEFKLDKRLSVVKSFKAQNHPPDFDHTRWLFETKGTYGYGNAVWPKDGFGSNGYEPPPDFGKKSRRPLTRKVGVSAAILSPYRLLILMRLAALGLFLTWRIRHRNHEAMWLWGMSVTCELWFAFSWLLDQLPKLCPVNRVTDLSVLKERFESPNLRNPKGRSDLPGIDVFVSTADPEKEPPLVTANTILSILAVDYPVEKVACYLSDDGGALLTFEALAETASFARVWVPFCRKHQIEPRNPEAYFGQKRDFLKNKVRLDFVRERRRVKREYDEFKVRINSLPESIRRRSDAYNAHEELRAKKKQMETGSDVSELLKVPKATWMSDGSLWPGTWSSAEPDHSRGDHAGIIQAMLAPPNVEPEYGSEADGENLIDTTDVDVRLPMLVYVSREKRPGYDHNKKAGAMNALVRTSAVMSNGPFVLNLDCDHYIYNSLALREGMCFMLDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVSMRALDGLQGPMYVGTGCIFRRTALYGFSPPRASEHHGWFGRRKIKLFLRKSKVSKKQEDEVSVPINDHNDDDADIESLLLPKRFGNSSYLAASIPVAEYQGRLLQDSKGNGTQGRPAGSLAVPREPLDAATVAEAISVISCYYEDKTEWGKRVGWIYGSVTEDVVTGYRMHNRGWRSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRVAYFNVGMYPFTSMFLIVYCFLPALSLFSGQFIVQSLSVTFLVFLLGITVTLCLLALLEIKWSGITLHDWWRNEQFWLIGGTSAHPAAVLQGLLKVIAGVDISFTLTSKSATPEDGEDEFADLYVVKWSFLMVPPITIMMVNTIAIAVGVARTLYSPFPQWSRLVGGLFFSFWVLCHLYPFAKGLMGRRGKVPTIIYVWSGLLSIIISMLWVYVNPPSGARPQDYMNFQFP* 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4670 1168 Pfam Cellulose synthase 393 1158 IPR005150 GO:0016020|GO:0016760|GO:0030244
Mal3g4670 1168 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 597 746 IPR029044 -
Mal3g4670 1168 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 100 1158 - -
Mal3g4670 1168 MobiDBLite consensus disorder prediction 1 116 - -
Mal3g4670 1168 MobiDBLite consensus disorder prediction 1 52 - -
Mal3g4670 1168 SUPERFAMILY RING/U-box 151 203 - -
Mal3g4670 1168 MobiDBLite consensus disorder prediction 66 90 - -
Mal3g4670 1168 SUPERFAMILY Nucleotide-diphospho-sugar transferases 408 960 IPR029044 -
Mal3g4670 1168 MobiDBLite consensus disorder prediction 99 116 - -
Mal3g4670 1168 Pfam RING/Ubox like zinc-binding domain 162 202 - -
Mal3g4670 1168 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 100 1158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4670 Mal-Chr3 126530998 126535550 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4670 33 1168 Glycosyltransferase AT3G03050 65.112 0.0 1536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4670 K00770 - gmx:100797597 2011.88