Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4660 ATGGCTTCTGCACCTTCCATGTCAGTTTCTTTGGAGTGTGTGAACGTATGCAATTCTTGGAGAGGGGATGGAAATGGAAGATATGATTGTAATCATCTATCGTGTGCGTCAAAAGCTCCTAGGGTTCTTACTGGATTTCTTGCCACCACGGCTCATCATTACTCATTGTTCAATTGTCGAAATGGAAGAAAGAACCAGTTTAATTTTGCATGTGAAGCATTTAGTATAGTAGGTTCGTATTCCGATGAAGCACTTGGCGTCACACTTCGTGAGGGATTCTCTAGATCCATCTTTTCTAGATTTGCATCTAGAGGATGGCAATTGTCTTGTTCTTCGCCTTTTTCCTCGGATGTTGCTAGCGAGTTTTCCCCTGGAATTTTGTGGGAGGATCTTAAGCCCGTGATCTCGTACCTGCCTCCTAAAGAACTGGAGTTAGTTCATAATGCTTTTACGTTGGCATTTAAAGCTCATGATGGTCAGAAAAGACGCAGCGGTGAACCCTTCATTATTCATCCGGTTGAGGTTGCACGGATTCTTGGAGAACTTGAACTTGATTGGGAGTCAATTGCTGCTGGATTACTTCATGACACGGTTGAAGATACAGATGTTGTGACTTTTGAGAGGATAGAGGAGGAATTTGGTGCTACTGTGCGCCACATTGTGGAAGGAGAGACTAAGGTGTCAAAGCTGGGGAAGTTGAAGTACAAGAATGAAAATGATTCTGTTCAAGATGTGAAAGCAGAGGACCTTCGGCAAATGTTTCTGGCTATGACAGAGGAGGTTCGTGTCATTATCGTTAAATTAGCAGACAGGTTACATAACATGCGCACTCTTTCACATATGCCTCCACATAAACAGAATAGCATTGCAATGGAGACATTACAGGTATTTGCTCCTTTGGCAAAATTGCTTGGGATGTATCAAATTAAGTCAGAACTAGAAAATCTATCATTTATGTACACAAATCCTGAAGATTATGCAAAGGTGAAGAGAAGAGTTGCCGACCTATTCAAAGAACATGAGAAAGATCTTTTAGAGGCAAACAAAATATTGTTAAAGAAAATCCAAGATGATCAATTCTTAGACCTTATGACAATTAAAACGGAAGTTCGTGCTGTGTGTAAAGAACCTTACAGTGTCTATAAAGCTGTGCTCAAATCTAAAAGTTTGATCAATGAGATTAACCAAATTGCACAGCTTCGTATCATTATTAAACCAAAGCCATGCGTTGGGGTTGGGCCTTTATGCAGTCCACAGCTGATTTGCTATCATGTTCTGGGGTTGATCCATGGAGTCTGGACCCCTATTCCTAGATCTGTGAAGGATTATATTGCAACCCCTAAACCTAATGGGTACAAAAGTCTTCATAGCACTGTGATTCCGTTTTTGTATGAGAGTATGTTCAGGCTTGAAATCCAGATTAGAACAGAAGAAATGGATTTGATAGCTGAGAGGGGCATTGCAGCTCACTATAGTGGGAGAGAATTCGTCACTGGCTTGGTTGGAAGTGCAGTGCCCAGTAGTAAAACCTCAAGGGGGAAGACAGTGTGTCTTAGCAATGCCAACATTGCACTCAGAATTGGCTGGCTCAATGCTATTAGAGAGTGGCAAGAAGAGTTTGTTGGCAACATGAGTTCTAGGGAATTTGTGGACACTGTTACAAGAGATCTTTTGGGCAGTCGTGTCTTTGTATTTACACCCAGTGGAGAGATTAAGAATCTTCCTCAAGGTGCTACAGTAATTGACTATGCTTATATGATCCACACTGAAATTGGCAACAAGATGGTAGCTGCAAAGGTCAACGGCAATCTTGTTTCTCCTGCGCGCGTGCTTGCAAATGCAGAAGTTGTGGAGATAATCACATATAATGCACTTTCTAGCAAATCAGCTTTTCAAAGGCATAAGCAGTGGTTGCAACATGCTAAAACACGGAGTGCGAGACACAAAATAATGAAGTTTCTGAGGGAGCAAGCTGCACTTTCCGCTGCTGATATCACTACAGAAGCAGTTAATGACTTTGTCAGTGATTCTGACGGGGATAGTGAATCTGAAAAGCTGTCAAATGGTTCCAGTAGTTCCAAACATAAAAGGGGGAAAATATTATTGAACGGTGTGGAAATATCAACTTCAGAAAGACGTGAGACTGTCCTCCAGAGTAAGAATGGAAGTGCTTGGACACCCAAGGTCAATGGAAAACACAATAAGCACGTGCATCATGTAAATTTGAACGGCAAGGGGGACATGATGCTGCAGGGAAACCATGTCGCCAATATGATTCAAGTTAACAATCCAAAATATAAAGAAGTCCTGCCAGGTTTAGAAAGTTGGCAAGCCCACAAAATTGCCTCATGGCACAATATAGAAGGGCATTCCATCCAATGGTTATCTGTAGTATGCATAGACCGAAGAGGCATGATGGCTGAGGTCACTACAGCAATGGCCACTGCAGACATAGCCATATGTTCTTGTGTGGCTGAGGTTGACGGAGGAAGGGGAATGGCTGTTATGTTATTTCAAGTTGAAGGAAATTTAGAAAATTTGGTGAGTGCTTGCTCTAGAGTAGATCAAATACTAGGTGTTTTGGGATGGTCTACTGGCTGCAGCTGGCCAAGCTTGATGGAAAACCATGGCGTTCTTGAATGCTAG 2646 0.4214 MASAPSMSVSLECVNVCNSWRGDGNGRYDCNHLSCASKAPRVLTGFLATTAHHYSLFNCRNGRKNQFNFACEAFSIVGSYSDEALGVTLREGFSRSIFSRFASRGWQLSCSSPFSSDVASEFSPGILWEDLKPVISYLPPKELELVHNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSVQDVKAEDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSELENLSFMYTNPEDYAKVKRRVADLFKEHEKDLLEANKILLKKIQDDQFLDLMTIKTEVRAVCKEPYSVYKAVLKSKSLINEINQIAQLRIIIKPKPCVGVGPLCSPQLICYHVLGLIHGVWTPIPRSVKDYIATPKPNGYKSLHSTVIPFLYESMFRLEIQIRTEEMDLIAERGIAAHYSGREFVTGLVGSAVPSSKTSRGKTVCLSNANIALRIGWLNAIREWQEEFVGNMSSREFVDTVTRDLLGSRVFVFTPSGEIKNLPQGATVIDYAYMIHTEIGNKMVAAKVNGNLVSPARVLANAEVVEIITYNALSSKSAFQRHKQWLQHAKTRSARHKIMKFLREQAALSAADITTEAVNDFVSDSDGDSESEKLSNGSSSSKHKRGKILLNGVEISTSERRETVLQSKNGSAWTPKVNGKHNKHVHHVNLNGKGDMMLQGNHVANMIQVNNPKYKEVLPGLESWQAHKIASWHNIEGHSIQWLSVVCIDRRGMMAEVTTAMATADIAICSCVAEVDGGRGMAVMLFQVEGNLENLVSACSRVDQILGVLGWSTGCSWPSLMENHGVLEC* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4660 881 SUPERFAMILY Nucleotidyltransferase 323 496 IPR043519 -
Mal3g4660 881 Gene3D - 794 861 - -
Mal3g4660 881 Gene3D Beta Polymerase, domain 2 324 477 IPR043519 -
Mal3g4660 881 ProSiteProfiles TGS domain profile. 558 621 IPR004095 -
Mal3g4660 881 ProSiteProfiles HD domain profile. 168 275 IPR006674 -
Mal3g4660 881 MobiDBLite consensus disorder prediction 712 731 - -
Mal3g4660 881 Pfam Region found in RelA / SpoT proteins 375 491 IPR007685 GO:0015969
Mal3g4660 881 MobiDBLite consensus disorder prediction 674 697 - -
Mal3g4660 881 Gene3D Hypothetical protein af1432 129 321 - -
Mal3g4660 881 SUPERFAMILY HD-domain/PDEase-like 132 321 - -
Mal3g4660 881 CDD NT_Rel-Spo_like 365 485 IPR007685 GO:0015969
Mal3g4660 881 Pfam TGS domain 562 621 IPR004095 -
Mal3g4660 881 PANTHER GTP DIPHOSPHOKINASE RSH1, CHLOROPLASTIC-RELATED 1 881 - -
Mal3g4660 881 SMART hd_13 164 284 IPR003607 -
Mal3g4660 881 SMART RelA_SpoT_2 375 497 IPR007685 GO:0015969
Mal3g4660 881 MobiDBLite consensus disorder prediction 712 728 - -
Mal3g4660 881 Gene3D - 555 630 IPR012675 -
Mal3g4660 881 CDD HDc 166 297 IPR003607 -
Mal3g4660 881 Pfam Sporulation protein Cse60 335 376 IPR020296 -
Mal3g4660 881 CDD TGS_RSH 563 621 IPR033655 -
Mal3g4660 881 SUPERFAMILY TGS-like 549 621 IPR012676 -
Mal3g4660 881 SUPERFAMILY ACT-like 794 860 IPR045865 -
Mal3g4660 881 Pfam HD domain 149 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4660 Mal-Chr3 126443634 126451410 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4660 178 493 EF-hand Containing Proteins AT3G17470 31.288 2.94e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4660 K00951 - gmx:100786637 1480.31