Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4658 ATGACTTCACTTTCTTTATTTTCTTGTTTCCTCCTTCTTCTTTCTCTCATTGCTTCTTCTTTTCTTCCCCATTGTAATTCCTTCCCTGCCCATCATCCTCGCTCTGCTACTCACAACTACAAAGATGCTCTCACCAAATCAATCATCTTCTTTGAAGGTCAGAGATCAGGGAAGCTCCCTTCCAATCAAAGAATGTCTTGGAGGAGAGACTCTGCTCTTTCCGATGGCTCATCCATGCATGTTGATTTGGTTGGAGGGTACTATGATGCAGGGGACAATGTCAAGTTTGGTTTTCCCATGGCATTCACAACCACAATGCTCTCATGGAGTGTTATTGAGTTCGGCGGTGTAATGAAAGATGAATTACAGAATGCTAGAGAAGCAATTCGCTGGGCCACTGATTATCTTCTCAAAGCCACTGCATATCCAGACACCATTTACGTTCAGGTGGGAGATGCTGAGAAAGATCACGCTTGTTGGGAGAGAGCAGAGGATATGGATACGCCAAGAAATGTGTATAAGATAGATAGAAACAATCCCGGTTCTGATGTGGCTGCTGAAACTGCTGCCGCTCTTGCCGCTGCTTCTCTGGCATTCAAAAAAACTGACCCTGCTTACTCTAAAACTTTACTGACAAGAGCAACCAGGGTTTTCCAGTTTGCTGATAAATATAGGGGGTCCTACAGCAATAGCTTGAAGCCTGTTGTATGCCCCTTCTATTGCTCTTACTCTGGTTATCAGGATGAGTTGCTGTGGGGTGCTGCTTGGCTTCACAAGGCCACTAAGAATCCAATGTATTTAGACTACATTAAGGTTAATGGACAGATACTTGGGGCTGATGTGATTGATAATACATTTGGATGGGATAACAAACATGTTGGAGCAAGGATACTCCTTTCTAAGGAATTTCTTGTTCAGAATGTGAAATCTCTTTATGACTACAAGGATCATGCAGACAATTTTATCTGTTCTGTTATCCCTGGAGACTCATTCTCTTCCTCCCAATATACCCCTGGTGGGCTTTTGTTCACATTGAGTGATAGTAACATGCAATATGTCACATCCACATCCTTTCTACTCTTAACTTATGCAAAATACTTAAGCACTGCCCATACGGTTGTGAATTGTGGTGGAACCATCATAACTCCAAAGAGTCTAAGAGCTATAGCCAAAAAACAGGTGGATTACTTGTTGGGAGATAATCCATTGAAGATGTCATACATGGTAGGGTATGGTACAAGGTACCCACAAAGGATACACCACAGGGGCTCATCACTACCGTCCATTGCTCTTCACCCTGACAAGATCCAATGTTCAGAAGGATTCAGTGTAATGGACTCACAATCTCCTAACCCCAACATTCTAGTGGGTGCTGTTGTTGGGGGACCTGATTTGCATGATAGTTTCCCAGATGAACGGACAGATTATGAGCAATCAGAGCCAGCTACTTATATCAATGCACCTCTTGTAGGATCACTAGCTTATCTTGCACACTCATTTGGACAACTCTAG 1512 0.4306 MTSLSLFSCFLLLLSLIASSFLPHCNSFPAHHPRSATHNYKDALTKSIIFFEGQRSGKLPSNQRMSWRRDSALSDGSSMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGVMKDELQNAREAIRWATDYLLKATAYPDTIYVQVGDAEKDHACWERAEDMDTPRNVYKIDRNNPGSDVAAETAAALAAASLAFKKTDPAYSKTLLTRATRVFQFADKYRGSYSNSLKPVVCPFYCSYSGYQDELLWGAAWLHKATKNPMYLDYIKVNGQILGADVIDNTFGWDNKHVGARILLSKEFLVQNVKSLYDYKDHADNFICSVIPGDSFSSSQYTPGGLLFTLSDSNMQYVTSTSFLLLTYAKYLSTAHTVVNCGGTIITPKSLRAIAKKQVDYLLGDNPLKMSYMVGYGTRYPQRIHHRGSSLPSIALHPDKIQCSEGFSVMDSQSPNPNILVGAVVGGPDLHDSFPDERTDYEQSEPATYINAPLVGSLAYLAHSFGQL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4658 503 PANTHER ENDOGLUCANASE 17 4 503 - -
Mal3g4658 503 SUPERFAMILY Six-hairpin glycosidases 37 501 IPR008928 GO:0005975
Mal3g4658 503 Pfam Glycosyl hydrolase family 9 40 492 IPR001701 GO:0004553|GO:0005975
Mal3g4658 503 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 396 422 IPR018221 -
Mal3g4658 503 PANTHER ENDO-1,4-BETA-GLUCANASE 4 503 - -
Mal3g4658 503 Gene3D - 35 503 IPR012341 GO:0005975
Mal3g4658 503 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 469 487 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4658 Mal-Chr3 126412543 126414751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4658 3 499 Glycoside Hydrolase AT1G02800 73.695 0.0 750
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4658 K01179 - gmx:100793900 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4658 3 126412543 126414751 Mal1g1720 1 22301690 22303881 PCT