Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4630 ATGGATGTCGAGGAACAACCTCTACCCTATCCGAACAACGTCAAACACTTCGGTCTTAAAAATTCTATTCAAACAAATTTTGGCGACGAGTATGTTTTCCAAATCATCCCAAAGGATGATTGGAGTGCAATGGCGGTTTCACTTTCAACGAACACAGTGAAACTGTATTCACCTGTGGTGGGTCAATACTATGGAGAGTGTAAGGGTCACACTGCAACCATTAATCAGATTTTGTTTTCGGCTCATTCTAATCCCAATATTCTTAGCTCTTGTTCTTCTGATGGAACTATCAGAGCTTGGGACACACGAACATTTCAGCAGGTTTCTATCATCAATGCTGGTTCTTCTCAAGAAGTCTTCAGCTTTTCTATTGGAGGGTCTAGTGGAAATTTAATTGCTGCCGGTTGTGATTCGCAGTTACTCTTGTGGGATTGGAGAAATAACAAGCAAATTGCATGCCTGGAAGATTCTCATGTGGATGATGTCACTCAGGTTCAATTTATCCCTGATGAACAAAGCAAGCTCATTTCTGCTTCAGTAGATGGGCTGATCTGCATATTTGATACCACTGGAGATATCAATGAAGATGATCATCTAGAGTCGGTGATTAATGTGGGAACTTCAATTGCAAAGGTGGGTTTTTTTGGAGAGAGTTATCAGAAGCTTTGGTGTTTAACACATATCGAAACCCTGGGTATCTGGGATTGGAAAGATGGTAGAAATGAAGTAAACTTCTCAGACGCGCGTACTTTAGCTTCTGAAAGTTGGAATTTGGATCATGTTGACTATTTTGTTGACTGTCACTATTCAAGTGAAGCTGAAAAACTATGGTTGATTGGCGGCACAAATGCGGGTACTTTGGGTTTCTTTCCTGTAAATTACAATGGAACGGCAACAATTGGAGCTGCAGAAGCAATTCTTGAAGGTGGCCATACAAGTGTTGTCAGAAGTTTTCTACCTATGTCTAGAATTCATAGTGGACTTGGTAGCTGTAGTAGCCATAACTCAGGCATCTTTGGATGGACAGGTGGGGAAGATGGTAGGCTATGTTGTTGGCTGTCTGATGATTCTCCTCAAAAAAATCAATCTTGGATTTCAAGTTCATTGATTATGAAACCAGAAAGAACTTGCAAGAGAAATCGTCATCAGCCCTACTAA 1158 0.4076 MDVEEQPLPYPNNVKHFGLKNSIQTNFGDEYVFQIIPKDDWSAMAVSLSTNTVKLYSPVVGQYYGECKGHTATINQILFSAHSNPNILSSCSSDGTIRAWDTRTFQQVSIINAGSSQEVFSFSIGGSSGNLIAAGCDSQLLLWDWRNNKQIACLEDSHVDDVTQVQFIPDEQSKLISASVDGLICIFDTTGDINEDDHLESVINVGTSIAKVGFFGESYQKLWCLTHIETLGIWDWKDGRNEVNFSDARTLASESWNLDHVDYFVDCHYSSEAEKLWLIGGTNAGTLGFFPVNYNGTATIGAAEAILEGGHTSVVRSFLPMSRIHSGLGSCSSHNSGIFGWTGGEDGRLCCWLSDDSPQKNQSWISSSLIMKPERTCKRNRHQPY* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4630 385 Gene3D - 22 208 IPR015943 GO:0005515
Mal3g4630 385 SUPERFAMILY WD40 repeat-like 40 238 IPR036322 GO:0005515
Mal3g4630 385 SMART WD40_4 147 188 IPR001680 GO:0005515
Mal3g4630 385 SMART WD40_4 104 144 IPR001680 GO:0005515
Mal3g4630 385 SMART WD40_4 60 101 IPR001680 GO:0005515
Mal3g4630 385 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 67 104 - -
Mal3g4630 385 ProSitePatterns Trp-Asp (WD) repeats signature. 88 102 IPR019775 -
Mal3g4630 385 PANTHER UNCHARACTERIZED 15 385 IPR039328 -
Mal3g4630 385 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 110 IPR001680 GO:0005515
Mal3g4630 385 Pfam WD domain, G-beta repeat 64 101 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4630 K24758 - gmx:100794786 663.299