Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4614 ATGGGCACTCTTCCTGCTTCCCCTTCACCCCCTTGGCCAACTGACCCTAACCCTAACAATAATCCCAATTCTATTTCTATTCCAAACCCTAATTTCCATCCCGATCAATCTCAAACCCTTGACTTCGATTCCCTTATGTCTCAATCCCCACCCACCACTTCGCCGGAATCTTCACAAACCTCACCACCGCCACCGCCTCTGTCCCTTCTTCAACTCTCCTTCAACCAAGACCACGCCTGCTTCGCTGCCGCCACAGACAACGGCTTCCGCATCTACAACTGCGACCCATTCCGCGAACTCTTCCGCCGGGAATTCGGCGGAGGAGGAATCGCCCACGTAGAGATGCTTTTCCGCTGCAACATACTAGCACTTGTTGGTGGTGGGTCCCACCCTCAGTATCCTCCCAACAAAGTCATGATCTGGGACGATCATCAAGGTACTTGCATCGGTGAACTCTCCTTCCGCGCCGCCGTTCGCGGTGTTCGGCTGCGGCGTGATCGGATAATTGTGGTGGTGGAGCAGAAGATATTTGTTTACAATTTCGCTGATTTGAAGCTGTTGCATCAGATTGAGACAATTGCGAACCCTAAGGGGCTTTGTTCAGTTTCACATGTGTCTGATTCTCTTGTTCTTGCTTGCCCTGGTTTGCATAAGGGTCAGATTCGTGTTGAGCATTTTGCACAGAAGAAGACTAAGTTTATATCTGCTCATGATTCTAGAATTGCTTCGTTTGCTCTCACACTTGATGGACAGTTAATCGCCACTGCTAGCGTTAAGGGTACGCTGATTCGGATTTATGATACCGACACCGGCACCCTACTTCAGGAAGTAAGGAGGGGTGCAAATGCAGCAGAGATATTTAGTTTGGCGTTTTCTTCCACTGCTCAATGGTTAGCGGCTTCAAGTGACAAGGGTACTGTCCATGTTTTTAGCCTTAAGGTTAATTCCAGTGTCCCTGAGAATGAAACATCACAAGGTTCGTCGAGTTCAGATGCTGCCATTGCCCCTTCTAGCTCATCTCGCTCCTTCATTAAATTTAAAGGAGTGTTGCCCAAGTATTTTAATTCAGAGTGGTCAGTTGCTCGGTTTCACTTACATGAGGGCACTCAGTACACAGTTGCATTTGGTCTCCAAAAGAACACAGTCATAATTCTTGGCATGGATGGAAGCTTCTATAGATGCCAGTTCGATGCAGCGCATGGAGGTGAAATGACCCAGCTGGAACATCACAATATTTTAATTCCAGAAACTGCTTTGTGA 1260 0.4794 MGTLPASPSPPWPTDPNPNNNPNSISIPNPNFHPDQSQTLDFDSLMSQSPPTTSPESSQTSPPPPPLSLLQLSFNQDHACFAAATDNGFRIYNCDPFRELFRREFGGGGIAHVEMLFRCNILALVGGGSHPQYPPNKVMIWDDHQGTCIGELSFRAAVRGVRLRRDRIIVVVEQKIFVYNFADLKLLHQIETIANPKGLCSVSHVSDSLVLACPGLHKGQIRVEHFAQKKTKFISAHDSRIASFALTLDGQLIATASVKGTLIRIYDTDTGTLLQEVRRGANAAEIFSLAFSSTAQWLAASSDKGTVHVFSLKVNSSVPENETSQGSSSSDAAIAPSSSSRSFIKFKGVLPKYFNSEWSVARFHLHEGTQYTVAFGLQKNTVIILGMDGSFYRCQFDAAHGGEMTQLEHHNILIPETAL* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4614 419 SUPERFAMILY WD40 repeat-like 58 392 IPR036322 GO:0005515
Mal3g4614 419 MobiDBLite consensus disorder prediction 1 67 - -
Mal3g4614 419 PANTHER WD REPEAT PHOSPHOINOSITIDE-INTERACTING-LIKE PROTEIN 31 419 - -
Mal3g4614 419 Gene3D - 70 391 IPR015943 GO:0005515
Mal3g4614 419 SMART WD40_4 270 311 IPR001680 GO:0005515
Mal3g4614 419 SMART WD40_4 227 267 IPR001680 GO:0005515
Mal3g4614 419 SMART WD40_4 54 93 IPR001680 GO:0005515
Mal3g4614 419 MobiDBLite consensus disorder prediction 19 55 - -
Mal3g4614 419 MobiDBLite consensus disorder prediction 1 18 - -
Mal3g4614 419 Pfam WD domain, G-beta repeat 280 310 IPR001680 GO:0005515
Mal3g4614 419 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 31 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4614 Mal-Chr3 126026360 126028921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4614 K22991 - gmx:100781692 606.29