Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4599 ATGAACAGCTTAACTGCGAGCTTCACCGCTCGAATGTATGACACACGCCGCAACGTAGTTCCGTTAAGAAACCGTTACGCTCACCAATTCAATAACAGACGCGTCACTGTTCTACCCAACAGAACCACTCTCACTTCTACAAGATTCGTTTGCATGGCGGAACCTTATCTGTTATTGAAACTTGAATCTGCTGAGAAGACATGGAAAGAATTATCGGTGAAGCTTGCTGATCCAGATATTGTTTCTAATCCTAGTGAGTATCAGAAGTTAGCACAATCGGTTTCAGAGCTTGACGTGGTTGTGACCTTGTATCAGAAATTTAAAGACTGTGAGAAGATGCTTGAAGAAACCAAAGCTTTATCAAAGGATGGTGGCAATGACGAGGATATGGTGGAAATGATATCTTACGAAATCGACTCTTTGTCCAAGCAACTCTCAGAGCTTGAGGACAAGCTGAAGGCTTTACTGCTTCCCAGTGATCCTCTGGATGCAAGAAACATAATGCTTGAAGTAAGAGCAGGTACTGGTGGCGACGAGGCTGGAATATGGGCTGGTGATCTTGTCAAAATGTATGAAAAATTTAGTGAACTTAATTCTTGGAAGCATTCTGCCATCTCATGCTCTGAGGCAGAAAAAGGGGGATACAAAACTTATGTGATGGAGATAAAAGGAAATCGTGTCTACAGTAAATTAAAATATGAATCTGGTGTCCACCGAGTTCAACGTGTTCCTCTTACAGAAACACAGGGCCGCGTACATACTTCCACTGCAACGGTGGCCATCATGCCAGAGGTTGATGAAGTTGAAATCGTAATTGACCCGAAAGATATTGAAGTGACAACGGCCCGTTCTGGGGGTGCTGGAGGCCAGAATGTTAATAAGGTTGAAACAGCAATTGATCTTGTTCATAAACCAACGGGAATCCGCATCTTTTGTACTGAGCAAAGAACTCAGATTCAGAACAAGAATCTTGCTTTTAAGTTACTGCGAGCCAAACTATATGAAATAAAGGTAAGGGAGCAGCAAGAGTCAATACGAAATCAAAGAAAATCACAGGTTGGTACTGGAGCACGTTCAGAAAAAATTCGGACATACAATTATAAGGACAACAGGGTTACTGACCACAGATTGAAGAAGAACTTTGTGCTCACCTCTTTTCTGGATGGTGGCATAGAGGATGCTGTTCAGTCTTGTGTTGCAATGGAACAAAAGGAGCTTATGGAAGAACTTGTTGAGTCCATGGGTGCTACTGCTTGA 1257 0.4256 MNSLTASFTARMYDTRRNVVPLRNRYAHQFNNRRVTVLPNRTTLTSTRFVCMAEPYLLLKLESAEKTWKELSVKLADPDIVSNPSEYQKLAQSVSELDVVVTLYQKFKDCEKMLEETKALSKDGGNDEDMVEMISYEIDSLSKQLSELEDKLKALLLPSDPLDARNIMLEVRAGTGGDEAGIWAGDLVKMYEKFSELNSWKHSAISCSEAEKGGYKTYVMEIKGNRVYSKLKYESGVHRVQRVPLTETQGRVHTSTATVAIMPEVDEVEIVIDPKDIEVTTARSGGAGGQNVNKVETAIDLVHKPTGIRIFCTEQRTQIQNKNLAFKLLRAKLYEIKVREQQESIRNQRKSQVGTGARSEKIRTYNYKDNRVTDHRLKKNFVLTSFLDGGIEDAVQSCVAMEQKELMEELVESMGATA* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4599 418 SMART PCRF_a_2 119 234 IPR005139 GO:0006415
Mal3g4599 418 ProSitePatterns Prokaryotic-type class I peptide chain release factors signature. 283 299 IPR000352 GO:0003747|GO:0006415
Mal3g4599 418 Pfam PCRF domain 65 259 IPR005139 GO:0006415
Mal3g4599 418 Pfam RF-1 domain 266 376 IPR000352 GO:0003747|GO:0006415
Mal3g4599 418 Coils Coil 131 151 - -
Mal3g4599 418 Gene3D - 337 414 - -
Mal3g4599 418 Gene3D - 51 161 - -
Mal3g4599 418 Gene3D - 163 273 - -
Mal3g4599 418 SUPERFAMILY Release factor 66 407 IPR045853 -
Mal3g4599 418 PANTHER LD18447P 7 417 - -
Mal3g4599 418 TIGRFAM prfA: peptide chain release factor 1 53 411 IPR004373 GO:0006415|GO:0016149
Mal3g4599 418 PANTHER PEPTIDE CHAIN RELEASE FACTOR APG3, CHLOROPLASTIC 7 417 - -
Mal3g4599 418 Gene3D - 274 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4599 Mal-Chr3 125794665 125801154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4599 K02835 - gmx:100777225 681.404