Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4597 ATGGGAGTTGTAACTCTTGGTGAATTGAAGCCTAGTGTTTCAGGGAGAAAGACTTTTCGTCCAAGTTCAAGCATAAGACATGCTACTGAATGGCCAATATCTGATGTCTCTAGTGATCTTACCATCCAAATAGGAGCATCAACATATTCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGATTTAGAAAGCTGCTATTAGAATCAAAAGATTCTAAAGCTTCGCGAGTAAGTCTTCCAACCGTGCCAGGTGGTGTCGAGTCATTTGAACTAGCTGCAAAATTCTGCTATGGAATCAATGTGGAATTCACCCTCTCAAATATTGCTATGCTACATTGCACATCTCATTTTCTTGAAATGACAGAAGAATTCTCAGAAAAGAATTTGGTGACAAGAGCTGAATCATATCTAAAGGAAACAGTACTCCCAAACACATCAAACATTATACATGTTCTTCACCATTGTGAAAATCTCGTTCCTTTTTCAGAAGAAATCAACCTTGTTAATAGGCTAATCAATGCTATTGCAAATAATGCATGCAAAGAGCAACTAACTTCTGGTTTGTTAAAACTTGATCACAATTTTCCTTCTAAAACAACATCAATAATGGAACCAGAAACACCCTTAGATTGGTGGGGAAACTCTTTCAATATTCTTAGTCTTGATTTCTTCGAACGAGTTATATCGGTTATGAAATCAAAGGGATTAACACAAGAGTTGATCAGCAAAATTTTGGTAAACTATGCACATAATTCTCTTCAAGGGACTAGTAGTGTTAGTCCCCTTGACATCGAATTGCAGAAGAAGCAAAGGGTGATTGTTGAGACTATAGTTCGCTTATTACCAACTCAATCGAGAAAAAGCTCGGTTCCAATAGCATTTCTTTCATGTCTATTGAAAACTGCCATAGCAACATTAGTATCAACTTCTTGTAGAAGTGATTTGGAGAGGCGAATCGGTTTACAACTCGATCAGGCAATTCTTGAAGACATACTTATTCCAACTAATTTGCATTCGAGTGCTCACAACACAATGTATGATATAGATTCAATTTTGAGGATCTTTTCTACTTTTCTAAATTTGGATGAGGTGGATGATGAAGACAGTGACTTCAGAGATGAAAATCAAATGATGTATGAGTATGAATTTGACAGTCCTGGATCTCCAAAACAAAGCTCAATTCTTAAGGTATCCAAATTGCTTGACAATTTTCTTGCTGAAGTAGCACTAGACTCAAACCTGTTGCCATCAAAATTCATAGCACTTGCAGAATTACTTCCGGATCATGCCCGCGTTACAAGCGATGGACTCTATCGAGCTGTTGACATTTTCCTTAAGGTTCATCCGAACATTAAGGACTCGGAGCGATATCGCCTAAGCAAAACAATTGATTGTCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGCTACCAGTTCAAATAGGTGTACAAGTTCTTTATTATGAACAAATAAGGCTTCGAAATGCGATGAACGGAGGACACAATCAAATCTTGTTTGGTGGAATTCATGGTCAATTTCCTCAAAGATCAGGGAGTGGTATAGGAAGTGGAGCAATTTCTCCTAGAGATAACTATGCATCAGTAAGAAGAGAGAACCGAGAGCTGAAGCTTGAAGTAACAAGAATGAGAATGAGGTTGAATGATTTGGAGAAAGATCATGTTTCTATGAAGCAAGAGCTTGTGAAGACACATCCTGCACACAAATTCTTCAAATCATTTGCCAAAAAATTAAGCAAGCTTAATAATCTATTTCGTATAAACAGTACTCGTGGCAATGAAACTGGAAGGTCTAGTTCACAAACTCGGTCTCGGTTTCCTTTTCAAAAGAGAAGGTGCCACTCAGTTTCATGA 1890 0.3788 MGVVTLGELKPSVSGRKTFRPSSSIRHATEWPISDVSSDLTIQIGASTYSLHKFPLVSRSGRFRKLLLESKDSKASRVSLPTVPGGVESFELAAKFCYGINVEFTLSNIAMLHCTSHFLEMTEEFSEKNLVTRAESYLKETVLPNTSNIIHVLHHCENLVPFSEEINLVNRLINAIANNACKEQLTSGLLKLDHNFPSKTTSIMEPETPLDWWGNSFNILSLDFFERVISVMKSKGLTQELISKILVNYAHNSLQGTSSVSPLDIELQKKQRVIVETIVRLLPTQSRKSSVPIAFLSCLLKTAIATLVSTSCRSDLERRIGLQLDQAILEDILIPTNLHSSAHNTMYDIDSILRIFSTFLNLDEVDDEDSDFRDENQMMYEYEFDSPGSPKQSSILKVSKLLDNFLAEVALDSNLLPSKFIALAELLPDHARVTSDGLYRAVDIFLKVHPNIKDSERYRLSKTIDCQKLSQEACSHAAQNERLPVQIGVQVLYYEQIRLRNAMNGGHNQILFGGIHGQFPQRSGSGIGSGAISPRDNYASVRRENRELKLEVTRMRMRLNDLEKDHVSMKQELVKTHPAHKFFKSFAKKLSKLNNLFRINSTRGNETGRSSSQTRSRFPFQKRRCHSVS* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4597 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Mal3g4597 629 Coils Coil 538 572 - -
Mal3g4597 629 MobiDBLite consensus disorder prediction 601 618 - -
Mal3g4597 629 MobiDBLite consensus disorder prediction 601 629 - -
Mal3g4597 629 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 618 - -
Mal3g4597 629 PANTHER OS12G0117600 PROTEIN 25 618 IPR043454 -
Mal3g4597 629 Gene3D Potassium Channel Kv1.1; Chain A 19 165 IPR011333 -
Mal3g4597 629 SUPERFAMILY POZ domain 22 137 IPR011333 -
Mal3g4597 629 Pfam BTB/POZ domain 37 139 IPR000210 GO:0005515
Mal3g4597 629 ProSiteProfiles NPH3 domain profile. 211 498 IPR027356 -
Mal3g4597 629 Pfam NPH3 family 211 474 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4597 Mal-Chr3 125780479 125784294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g4597 1 448 EF-hand Containing Proteins AT2G47860 58.787 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4597 - - mnt:21403382 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4597 3 125780479 125784294 Mal1g1760 1 22915128 22919378 PCT