Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4571 ATGGCGAACACTCAACCTTCATCTGCACCTTGTGGAGATGAAGTTAATGATGCAAATGGAGCTGAGAACTATCAGGAAACTGAGCTTTTTGAGGACACCTTAGTGATTGCTGGTCCATTCACCGAAACTGGGTTGGAAAATCTTGATCTGAATAATACTGAGATTGTAGAGGATTCAGAGCCTGTAGAGGATATGATAACTGGTACAACATGTGAGTATGAGACAGAAGTGGTGCTTGACAGCGAGGACGAAGAAATGAACAATGCGCACAAAGTGAATGTTGATGAAAGATTTCATGAGGATGAAAGTAGTCCAGCATTGAACAATTCGTCGGTGCTCTTCAAGAAGAGATTGCCTAAGCAACCAAACTCAAAATCAAATGCCACTACTTGTGGGAAATCTGGTGACAAAGGAGTTTCAATTGATGCTGAGAGCTTTGATGACAACAACCATCAACATCGATCTGCCAGGTTATATGATCATTATGATGCTCATTCACCAACCGTAGCTGCACTAGGCTTCGTGGATCAGTACTTGTTGTCAATAGATAAAGATCTATTTCAAGGATTTCAAAATGGAAAGATTGCTATGGAGAAATCACCTCAAGTCTCGGGTGCGAGAGGATCGGTTAGTCTGGCTAAGAAATTTAAAGCTCGAACTCAAAATGAAGATAAAGACCCTTTCAAATGGGCTGACAGCGATCAAAATTTAATAGAAGCTGGTAATTTCTGTAAAAAGCTTGAAGCATCTTTCAATTTTGGAACCCATGGACTCACATACAAGAGAAGAAGACAGAAAAAAGGTAGTCATCCTCAGAATCGAGGATACTGTAGTGCAAGTAACAGATGTGATGAGAACCAAGGAAACTCTAGTGCAAGTAACCGGTGTGATGAGAATTTCGTCCAAGAACCAAGAGTGGAAGCTGACAATAATAACTCTCTCAAGGAGTTGGGTGTTGATATTTATTCTAGTGTAGCACATACAGACATGTCTGATATTGGCTTAGACACTCAAATAGCTGCTGAAGCTATGGATGCCCTAGCCAATCAATCCCCTGGTGGCTTTCATTTCAGCGATGCTCAACAACCAGAGAACGTGTTTGATGCATCTTTCAGTGATTTGAAACAAGCTCATCAGAAAAATTCTTCATTTAAAGAGAATCCTGGTTCACATTCTATTGCACTGAAATCTTACAAGCGAAATGTATCTTCTTGTAGGTTCAGCAAAGTAACTTCTAAGTCCTCTAGCAAGCAAACTTACAATCAAGACTCAAATCCTGTCTCGGGGGAAATAAAAAAAATAATGGGAAATAGGTCAACTGTTGAAGGGCAGTTCAAAATTAATATTAGTTCGTCAATATGCAGTAAACGTGCATCACCTGAAGAGGTTTGCCTACTAGGAGAAGAGGATATGAGAATTCAACCTGCTTCCAAAGAACCCAAAATCCAGAATAAGGGCAGACAGACAAGAATGAAACATCAACCAAGCCATTCTAGAGAGAGGAACGAGAATGTTGAGGAGGATGTTATTAGATATAAGAGGAAGGGAAATTGTTTAGCGGCAGATCCAGTGAAGATAGATGCTAAGACAAAATGTCTTAATTTATCTACATGCTCATATGGTGTGGCCAGGAAGAGCAGTTTGAACCATCAGGTTGAAGTTAGTCTACGGCTATCGGCAACCAGCAGTTTTTCAAAGATTGACTCTTGGGATTATCCAAAAGGACCAAGAGGGAAAAGAAAGAGAGCTAATGCCCCAAGAGTTTTGTGCATCGATGATAAAGATAACAATGTTTATTCCACTAGGAGTCTAGAGGGCCGAGATGAGGTGCATAAATCTTGTCTCCCCCCAGTTTCAGCTGGTGATGCTATAAAATTTGAAAACCTGCATGATATGCGTCCCTTATTGCTAGCACATGTTGAATTATTATCAAACAAGAGTGTTGTACAATCTAGTTCAGAAATTTCCGCTCCAGTTGCTCCAAGTGAAGGCATTAAAATTTCAAATGCTAACCAAATATGCAATGAGCACCGCAAAAAGGCATGTGAGAAAAACCTACCCAAGTCTTCACTTTTGAAGGAACTTATCAGATTAGGAGTTCCCAAATCCACATCAGAAATGATGAGTAAAGATTCGAGACATCGAAGAGATATGACAAATGTTCGAGTTCTGTTTAGTCAACATTTGGATGACAGTGTCCTCAAGCAACAACAGAAGATCTTGGCGCGTCTTAATATATCTACTGCATCAAGCTCAATGGAAGCCACTCATTTCATAGCAGACAAGTTTACACGCACAAAGAATATGCTGGAAACAATGGCTCTTGGGAACTTAGTATTGACACACTCATGGCTTGAGAGTTGTGGACAAGCCAACTTTTTGATCGATGAGAAAAATTATATTTTGAGGGATATGAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCAGTTTCTCTTGCTCGAGCAAGACAAAAGCCACTCCTGAAGGGTAAACGAGTCTACATAACACCACGCATCAAACCTAATAAGGAAGTGGTTGCGAGCTTGGTTACAGCTGTTCATGGTCAGCTAGTGGATGAAAGTCAGATATTTGCAGACAAGAATGATAATATCTTAGATGATTTATTGATTCTTTCTTGTGAAGAAGACTTTGCAATATGCCGCCATTTCCTTAAGAGAGGAGCTGCTGTTTACAGTTCGGAGCTTGTTCTGAATGGAATTATAATCCAGAAATTGGAACTCGAGAGGCATAAACTGTTCGTGAATCAGGTTACAAAGAATAAACTAGGTAGATGTAATTGGTTTGGGAAGGTTTACAGAAGGCGTTTGAGGTCTTTAACGTGA 2844 0.4001 MANTQPSSAPCGDEVNDANGAENYQETELFEDTLVIAGPFTETGLENLDLNNTEIVEDSEPVEDMITGTTCEYETEVVLDSEDEEMNNAHKVNVDERFHEDESSPALNNSSVLFKKRLPKQPNSKSNATTCGKSGDKGVSIDAESFDDNNHQHRSARLYDHYDAHSPTVAALGFVDQYLLSIDKDLFQGFQNGKIAMEKSPQVSGARGSVSLAKKFKARTQNEDKDPFKWADSDQNLIEAGNFCKKLEASFNFGTHGLTYKRRRQKKGSHPQNRGYCSASNRCDENQGNSSASNRCDENFVQEPRVEADNNNSLKELGVDIYSSVAHTDMSDIGLDTQIAAEAMDALANQSPGGFHFSDAQQPENVFDASFSDLKQAHQKNSSFKENPGSHSIALKSYKRNVSSCRFSKVTSKSSSKQTYNQDSNPVSGEIKKIMGNRSTVEGQFKINISSSICSKRASPEEVCLLGEEDMRIQPASKEPKIQNKGRQTRMKHQPSHSRERNENVEEDVIRYKRKGNCLAADPVKIDAKTKCLNLSTCSYGVARKSSLNHQVEVSLRLSATSSFSKIDSWDYPKGPRGKRKRANAPRVLCIDDKDNNVYSTRSLEGRDEVHKSCLPPVSAGDAIKFENLHDMRPLLLAHVELLSNKSVVQSSSEISAPVAPSEGIKISNANQICNEHRKKACEKNLPKSSLLKELIRLGVPKSTSEMMSKDSRHRRDMTNVRVLFSQHLDDSVLKQQQKILARLNISTASSSMEATHFIADKFTRTKNMLETMALGNLVLTHSWLESCGQANFLIDEKNYILRDMKKEKEIGFSMPVSLARARQKPLLKGKRVYITPRIKPNKEVVASLVTAVHGQLVDESQIFADKNDNILDDLLILSCEEDFAICRHFLKRGAAVYSSELVLNGIIIQKLELERHKLFVNQVTKNKLGRCNWFGKVYRRRLRSLT* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4571 947 Pfam Regulator of Ty1 transposition protein 107 BRCT domain 707 802 IPR001357 -
Mal3g4571 947 ProSiteProfiles BRCT domain profile. 713 802 IPR001357 -
Mal3g4571 947 MobiDBLite consensus disorder prediction 271 295 - -
Mal3g4571 947 MobiDBLite consensus disorder prediction 409 430 - -
Mal3g4571 947 CDD BRCT_PAXIP1_rpt6_like 827 913 - -
Mal3g4571 947 MobiDBLite consensus disorder prediction 262 295 - -
Mal3g4571 947 CDD BRCT_MDC1_rpt1 721 795 - -
Mal3g4571 947 Gene3D BRCT domain 826 927 IPR036420 -
Mal3g4571 947 MobiDBLite consensus disorder prediction 475 505 - -
Mal3g4571 947 Gene3D BRCT domain 707 825 IPR036420 -
Mal3g4571 947 MobiDBLite consensus disorder prediction 409 428 - -
Mal3g4571 947 MobiDBLite consensus disorder prediction 1 26 - -
Mal3g4571 947 MobiDBLite consensus disorder prediction 104 134 - -
Mal3g4571 947 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 5 927 - -
Mal3g4571 947 PANTHER BRCT DOMAIN-CONTAINING PROTEIN-RELATED 5 927 - -
Mal3g4571 947 MobiDBLite consensus disorder prediction 96 136 - -
Mal3g4571 947 SUPERFAMILY BRCT domain 704 818 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4571 Mal-Chr3 125523590 125527661 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4571 - K14972 gmx:102659913 1026.16