Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4558 ATGCTGAACGTGCTACGTGTGCATCTTCCTTCTGATATTCCCATTGTAGGCTGTGAACTCACGCCTTATGTGCTCCTTCGCAGACCTGATAAAACCGTTACAACCGACGATGTCTCCGAATCCGCTCCTTTAGATGGTCATTTTTTGCGCTATAAGTGGTATCGTGTGCAGAGTGATAAAAAGGTTGCTGTTTGTAGCGTGCATCCATCCGAGCAGGCCACACTGCAGTGCCTAGGTTGTCTTAAGGCTAAAATACCTGTTTCCAAAAGTTACCATTGCAGTCCAAAGTGTTTCTCAGATGCATGGCAGCATCACCGAGTCTTACATGACCGTGCTGCAAGTGCAGTTAATGAAAATGGAAATGAGGAGGAGGAGGTTTTCGGGAGATTTAATAATTCTGGGTCTGGGTCGATCAATACCACCTTATCCTCGTCTGCTTCTAGTGCTAGCCTGACAAATGGGTCTGCAACTGTGTATCCTACAACTGTTACACAACGAAATGGCGGTGAAACTTGGTTTGAAGTTGGACGATCAAAGACATATACCCCAACAGCTGATGACATTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTTACTGTGGGGCACACAAACACTATACTAACTTCCCGGGTCATTCCAGCTCCCTCACCTATCCCTCGCCAACTGATACCTGTTGACGCGATGGGTAGTTTGGATGTGGATGGGCGTATAACATCATCAGGAACTTTTACTGTTTTATCATACAACATATTGTCTGATGCATATGCCTCAAATGATCTATACAATTACTGCCCTTCGTGGGCTTTATCCTGGCCGTATCGCAGACAAAATTTGTTACGAGAAATAGTTGGTTACCGCGCCGATATTATTTGTCTCCAGGAGGTTCAAAGTGATCATTATGATGAATTTTTTGCTCCTGAACTGGACAAACATGGCTATTATGGTCTTTACAAGAGAAAAACAAATGAGGTATATAATGGCAACATAAATACAATTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTCTCGCATGTGAAGAAATATGAGGTTGAGTTTAATAAGGCTGCACAGTCTTTAACAGATGCCATGATTCCAACCTCTCAGAAGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTCGCACTAATAGTTGTTTTAGAAGCAAAAGTTAACAATCAGCCTGTTGATAATCCAGGGAAAAGACAGCTTCTGTGTGTGGCAAATACACATGTAAATGTCCACCAAGATTTAAAGGATGTCAAGCTCTGGCAGGTGCACACTCTCTTAAAAGGATTGGAGAAAATTGCAGTCAGTGCAGACATTCCAATGCTGGTTTGTGGAGATTTCAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGACCCATCCCACCCTGATTTAGCAGTTGACCCACTCAACATATTGCGTCCTCACAGCAAGTTGATTCACCAGTTGCCACTGGTCAGTGCTTATTCTTCGTTTGCAAGAACGGTTGGTCTTGGATATGAGCAGCATAAGCGGAGAATGGACAGCTCAACAAACGAACCTTTATTTACAAATGTCACTAGAGATTTTATTGGCTCTCTTGATTATATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTATTAGAGCTATTGGATGAGGAGAGTTTGAGGAAAGACACAGCACTACCTTCTCCTGAATGGTCCTCGGATCATATAGCTCTCTTAGCTGAGTTTCGCTGCTGCAAAAATAAACCCAGGCGATGA 1803 0.4298 MLNVLRVHLPSDIPIVGCELTPYVLLRRPDKTVTTDDVSESAPLDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCLKAKIPVSKSYHCSPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNNSGSGSINTTLSSSASSASLTNGSATVYPTTVTQRNGGETWFEVGRSKTYTPTADDIGHVLKFECVVVDAETKLTVGHTNTILTSRVIPAPSPIPRQLIPVDAMGSLDVDGRITSSGTFTVLSYNILSDAYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDEFFAPELDKHGYYGLYKRKTNEVYNGNINTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTSQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAVSADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLIHQLPLVSAYSSFARTVGLGYEQHKRRMDSSTNEPLFTNVTRDFIGSLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKPRR* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4558 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
Mal3g4558 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 1-LIKE 34 595 - -
Mal3g4558 600 Gene3D Endonuclease/exonuclease/phosphatase 221 599 IPR036691 -
Mal3g4558 600 CDD Deadenylase_CCR4 252 593 - -
Mal3g4558 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Mal3g4558 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 34 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4558 Mal-Chr3 125415086 125421051 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4558 K12603 - gmx:100808935 1085.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4558 3 125415086 125421051 Mal1g3536 1 62358417 62363039 PCT