Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4553 ATGGCGGTTTCCGAACAAGAATGCTCTTCCGCCAAGTCAAGTCCTTCTTCTTCATCCTCCTCTACTTCTCGCTATTATCTCTCCAAGTGCGTTGTCAGAGCAAGCGCCATTCTCCAGGTTCTCTACGCTCACCTTCGTTCTCCTTCCTCAAACGACGTCGTTTTCGGCAAGGAGACATCTATAGAGTTGGTGGTGATTGATGAGGATGGGAATGTACAATCCGTTTGCGATCAGCCTGTTTTTGGCATCATTAAAGATCTTGCTGTATTGCCATGGAATGACAAATTTCGTGCCCGTCGCCCACAGACTCAAGGTAAAGACCTCTTGGTTGCTTTATCTGATTCCGGGAAGCTGTCATTGCTCACATTTTGCAATGAAATGAACAGGTTTTTTCCTATAACACATGTTCAACTGTCTAATCCTGGAAACATAAGGGATCTTCCGGGAAGAATGCTGGCAGTTGATTCCAGTGGTTGTTTTATTGCTGCAAGTGCATATGAAGATCGGCTGGCTCTGTTTTCTATGTCAACATCAACGACTGGGAGTGATATAATTGATGAGAGAATAATATATCCCTCTGAAAGTGAAGGGACTGCAAGTACTTCCAGAACCATGCAGAAAACCAGTATTAGTGGTACTATTTGGAGTATGTGCTTTATTTCACTAGATTCCCGACAACAAAGCAAGGAGCATAATCCTGTATTAGCTATTATTCTAAATAGGAGGGGAGCTCTTCTAAATGAATTACTCTTATTGGAATGGAATGTTAAAGCACATACAATCTCTGTTATTTCTCAGTATGTTGAAGCCGGACCTCTAGCACATAACATTGTTGAAGTTCCCAACTCTCCGGGACTTGCGTTTCTATTCAGGGCTGGTGATGTTCTGTTAATGGATTTTAGAGATCCTCACAATCCATTATGTGTATACAAGACTTGCTTGAACATTTTATCCAATGCAATAGAAGAGCAGACTTATGTGGACGACTCTTGTAAATTACACGATCTTGATGATGAAGGCTTTAGTGTTGCCGCCTGTGCTTTGTTGCAGCTTAGTGATTATGACCCTATGTGCATAGACAGTGACAGTGGTGGTACTAATTCTGGTCCGAAGTACATATGCTCTTGGAGTTGGGAACCTGAAAATTATGAAGTTCCTAGGATGATCTTTTGTGTAGACACTGGAGAATTTTTTATGATTGAAGTTTTTTTCGACTCTGAAGGCCCTAGATTCAGTCTCTCGGAGTGTCTCTATAAAGGTCTACCTTGTAAAGAACTTTTGTGGGTTAAGGGTGGATATCTAGCATCAATTGTAGAAATGGGGGACAGCGTGGTCCTGAAAATGAAAGATGGAAGGCTATGCTTTACAAATCTTATTCAAAACATTGCACCAATCTTTGATGTGACATCTGGGGATTATCATGATGAGAAGCATGACCAAATGTTTGCTTGCTGTGGTGTGACACCCGAGGGGTCATTAAGGATTATTCAAAGTGGTATCAATGTAGAAAAGCTACTTAGAACCCCTTCTACTTATGAAGGGGTAGCTGGTACTTGGACTGTTCGAATGAAAATTTCAGATTCATATCATTCTTTTCTAGTTCTATCATTTCTTGGGGAAACCAGAATATTGTCCGTTGGCGTAAGTTTTACTGATGTGACTGATTCTGTTGGTTTCCAACCTAATGTATGTACTTTGGCATGTGGCCTTGTAAGTGATGGTTTGCTTGTTCAGATATACCAATCTGCTGTTAAGCTTTGTTTGCCTACTAAGGATGGTCATTGTGAAGGTATCCCTTTGTCCTCTCCTATTTGCACATCTTGGTCCCCAGACAATCTGAATATTAGTTTGGGGGCAGTTGGGCATAATTTCATAGTTGTGTCAACCTCTAACCCATGTTTTTTGTTTATCCTCGGGATTAGAATGCTATCAGCTTATCAATATGAAATTTATGAAATGCAACATTTGGAACTGCAGAACGAAGTTTCATGCATTTCCATTCCTAGAACAAAGTATGGGCAAAAACAATCAAATTCATCCATGTCAGAAAATAATAGCTCCATGGCTTCTTCTGTAAGTGGAGTGGACATCAATAAAACATTTGTTATTGGCACCCATAGGCCTTCTGTGGAAATTTGGTCTTTTGATCCAAATGGTGGAGTCACTGTAGTTGCTTGCGGAACTATTTCATTAAAAAGTACAATGGGGACTGCTAAAAGTTTTTGCATACCTCAAGATGTACGACTTGTATTTGTTGATAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTCCTTCGCTTTGAGTGGCCAACAGAACCGTCTCATTCATCATCAATAAATGTGGTGGACACTGCTTTATCTTCTATACATTTGGTAAATTCTATGACCATGGCTATCAATGTGAACCTTCCTTGCATGCTTCAATTGATTGCCATTCGTCGCATTGGCATCACTCCAGTTTTCTTGGTGCCCCTGGATGACACACTTGATGCTGATATAATTGCACTAAGTGATAGGCCTTGGTTGTTGCACAGTGCAAGACACAGCATTTCCTATACTTCTATCTCATTTCAACCATCTTCACATGTAACTCCTGTTTGCTCTATTGACTGTCCAAAAGGAATATTATTTGTTGCTGAAAACAGTTTGCATCTGGTGGAGATGGTCCACATCGAGAGACTTAATATGAGGAAGTTTCATTTAAAGGGCACTCCACGGAAGGTCCTATATCACAACGAAAGTCGGATGTTACTTGTGATGAGGACTGAACTGAGTATTGGTACATGTTTGTCTGACATATGTTGTGTGGATCCCCTAAGCGGGTCAGTACTATCGTCTTTTAGACTAGAACTTGGAGAAACAGCAACATCCATGGAATTAATTAGGGTTGGAAGTGAGCAGGTGCTTGTGGTTGGAACTAGTCTGTATTCGGGTCCACCCGTAATCCCTAGTGGTGAAGCTGAGAGTGCCAAGGGTCGTCTTCTTGTTCTCTGCATTGATCATGTGCAAAATTCAGACAGTGGTTCAATGACCTTTTGTTCGAAGGCAGGGTCATCATCTCAAAAAACTTCACCGTTCAATGAAATTGCTGGGCATGTTCCTGAACTATCAAGCAGCAGCCTTGGCAGCAGCCCTGATGATAATAGCTTTGATGGCATCAAACTGGATGAAAGTGAAATTTGGCAGTTTCGATTGGCTTCCGCAACTACATGGCAGGGAATTGTACAAGCGATCTGTCCTTATCTTGATCGCTATTTTTTGGCAGCAGCTGCTAATGCTTTCTATGTCTGTGGTTTCCCAAATGACACTCCACAAAGAGTGAGAAAGTATGCTGTGGGAAGGACGCGTTACTCGATAAGATCTTTGACTGCGTATTATAGTAGAATTGCAGTTGGTGATAATCGTGATGGTATCCTTTTCTTTTCTTACCATGAGGAGGCAAGAAAATTGGAGCAACTTTACGGTGATCCATCACAGAGGTTGGTTGCTGATTGCATTCTTATGGATGATAATACGACTATTGTTTCAGATCGTAAAGGAAGCGTAGCTGTTTTATGTTCAGATCATTTGGAAGCACCAAACAATGCAAGTACGGAATGCAATTTGAGACTAAGTTGTGCTTATTTCATGGCTGAGATAGCTGTGAGCATCCGAAAGGGTTCATATTCATACAGACTTCCAGCTGATGATTTGTTGTCAGGTGGCATTGGCCCCAAGACAAATGTTGACTCGCTACAAAATACTATTCTTATTAGTACTCTGTTAGGAAGCATAATGATCTTCATCCCTTTATCAAGAGAGGAATATGAGCTCTTAGAAGCTGTGCAAGCAAGACTTGCTGTCCATCATTTGACGGCACCTGTTCTTGGAAATGATCATAATGAGTTTCGCAGCCGTGAAAATCCAGTTGGAGCACCCAAGATACTTGACGGGGACATGTTGACACAGTTTCTGGAGCTGACAAATATGCAGCAAAATAACATTTTGTCTTTGGAACCACTTGACGCTGTAAAACCAAGTTTGAAGCCACTCCTACCCCAATTTTCTGTCAACCAAGTTGTTCAACTTCTTGAACGGGTTCACTATGCACTGAACTAA 4104 0.4125 MAVSEQECSSAKSSPSSSSSSTSRYYLSKCVVRASAILQVLYAHLRSPSSNDVVFGKETSIELVVIDEDGNVQSVCDQPVFGIIKDLAVLPWNDKFRARRPQTQGKDLLVALSDSGKLSLLTFCNEMNRFFPITHVQLSNPGNIRDLPGRMLAVDSSGCFIAASAYEDRLALFSMSTSTTGSDIIDERIIYPSESEGTASTSRTMQKTSISGTIWSMCFISLDSRQQSKEHNPVLAIILNRRGALLNELLLLEWNVKAHTISVISQYVEAGPLAHNIVEVPNSPGLAFLFRAGDVLLMDFRDPHNPLCVYKTCLNILSNAIEEQTYVDDSCKLHDLDDEGFSVAACALLQLSDYDPMCIDSDSGGTNSGPKYICSWSWEPENYEVPRMIFCVDTGEFFMIEVFFDSEGPRFSLSECLYKGLPCKELLWVKGGYLASIVEMGDSVVLKMKDGRLCFTNLIQNIAPIFDVTSGDYHDEKHDQMFACCGVTPEGSLRIIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDSYHSFLVLSFLGETRILSVGVSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDGHCEGIPLSSPICTSWSPDNLNISLGAVGHNFIVVSTSNPCFLFILGIRMLSAYQYEIYEMQHLELQNEVSCISIPRTKYGQKQSNSSMSENNSSMASSVSGVDINKTFVIGTHRPSVEIWSFDPNGGVTVVACGTISLKSTMGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEWPTEPSHSSSINVVDTALSSIHLVNSMTMAINVNLPCMLQLIAIRRIGITPVFLVPLDDTLDADIIALSDRPWLLHSARHSISYTSISFQPSSHVTPVCSIDCPKGILFVAENSLHLVEMVHIERLNMRKFHLKGTPRKVLYHNESRMLLVMRTELSIGTCLSDICCVDPLSGSVLSSFRLELGETATSMELIRVGSEQVLVVGTSLYSGPPVIPSGEAESAKGRLLVLCIDHVQNSDSGSMTFCSKAGSSSQKTSPFNEIAGHVPELSSSSLGSSPDDNSFDGIKLDESEIWQFRLASATTWQGIVQAICPYLDRYFLAAAANAFYVCGFPNDTPQRVRKYAVGRTRYSIRSLTAYYSRIAVGDNRDGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTTIVSDRKGSVAVLCSDHLEAPNNASTECNLRLSCAYFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQNTILISTLLGSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPVGAPKILDGDMLTQFLELTNMQQNNILSLEPLDAVKPSLKPLLPQFSVNQVVQLLERVHYALN* 1368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4553 1367 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 20 1364 - -
Mal3g4553 1367 Gene3D - 36 461 IPR015943 GO:0005515
Mal3g4553 1367 Gene3D - 500 895 IPR015943 GO:0005515
Mal3g4553 1367 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g4553 1367 Pfam CPSF A subunit region 935 1321 IPR004871 GO:0003676|GO:0005634
Mal3g4553 1367 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 107 667 IPR018846 -
Mal3g4553 1367 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 20 1364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4553 Mal-Chr3 125360752 125377934 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4553 K12830 - gmx:100799711 2141.31