Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g4551 ATGCGAAGACCAAGAACTATGAGACCAAATATCGTCACTGAGGCAGGGTTGCCTACTAGGTTGAATCAATGGTGGGAAAGCATTCCATTTTTCACTTCTGCAGTTGTGATTGTCTGTGGAGCAATTTACTTTGTCTGTCTTTTGGTTGGTTATGATTCCTTTTCCGAGATTTGCTTCTTGCCTTCCGCTGTTGTAACGCGATTTCAAGTTTACAGGATTTACACTGCCATTCTTTTCCATGGTTCACTGCTTCATGTTCTCTTCAACATGATGGCTTTAGTTCCTTTGGGCTCTGAGCTGGAGAGGATCATGGGATCAGTTCGCTTGCTATATGTCACTATTTTGTTGGCTACGAGCAATGCTATAATCCATGTTTCCATAGCACTGCTGGTGGCATACAATCCTATTCTTACGAATGGTTATCTCATGAATGAGTGTGCTATTGGGTTCTCAGGAGTTTTGTTTTCGATGATTGTTATAGAGACAAGCTTGAGTGGAGTTCAATCGAGGAGTGTGTTTGGGTTGTTTAATGTGCCTGCCAAGTGGTATGCATTTTTTTTGTTGGTTGTGTTCCAGCTCCTCATGCAAAATGTCTCACTACTTGGACACCTTTCTGGTATTGTATCTGGGTTTGCATATACATATGGCTTGTTTAATTTCCTCATACCTGGGACATCATTTTATTCTTCAATTGAAGCCTCCTCCTGGCTTTCATCATGTGTGAGACGTCCTAAATTCATTGTTTGCACTGGCGGAAATCCTTTGGGCTATATCCCGACACATACAAGCCAAAATTCAACCACTAGTGGAATATTTTCCGGGAATATTTGGGGGAACCTATCATCATTGATGCCTCGAAGAGAAGTGTCTTCTCAGCCTCAGTCAGTTGAGGACAGTAGGTTCCCTGGGAGGGGAAGGACCCTTGCTGCTGCTCAAGGTCAAGCTGCTTCTGGTTTTCATTCAGATTCAAATCTTCAAGCCAGACTCTTAGAGGATGATAGTCCCAATCATCCCTCAGATCCAGCCATTCTAAGTACTAGGCATCCAGTCGATAATGTAGCTACAGCCGGAGCAGGTGTTCCACATCATCAGGGAGCAGTTGTTTCAGAAGAAGAGATTAAGAAACTTGTATCAATGGGCTTTGATAGGACGCAAGTGGAAGTGGCGCTGGCGGCTGCTGATGGTGATCTTAATGTGGCAGTGGAAATACTCATGAGCCAGCAGGATTAA 1230 0.4374 MRRPRTMRPNIVTEAGLPTRLNQWWESIPFFTSAVVIVCGAIYFVCLLVGYDSFSEICFLPSAVVTRFQVYRIYTAILFHGSLLHVLFNMMALVPLGSELERIMGSVRLLYVTILLATSNAIIHVSIALLVAYNPILTNGYLMNECAIGFSGVLFSMIVIETSLSGVQSRSVFGLFNVPAKWYAFFLLVVFQLLMQNVSLLGHLSGIVSGFAYTYGLFNFLIPGTSFYSSIEASSWLSSCVRRPKFIVCTGGNPLGYIPTHTSQNSTTSGIFSGNIWGNLSSLMPRREVSSQPQSVEDSRFPGRGRTLAAAQGQAASGFHSDSNLQARLLEDDSPNHPSDPAILSTRHPVDNVATAGAGVPHHQGAVVSEEEIKKLVSMGFDRTQVEVALAAADGDLNVAVEILMSQQD* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g4551 409 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 367 407 IPR015940 -
Mal3g4551 409 Pfam Rhomboid family 66 219 IPR022764 GO:0004252|GO:0016021
Mal3g4551 409 SMART uba_6 369 406 IPR015940 -
Mal3g4551 409 CDD UBA_At3g58460_like 370 405 - -
Mal3g4551 409 Gene3D - 344 409 - -
Mal3g4551 409 PANTHER DER1-LIKE PROTEIN, DERLIN 10 408 - -
Mal3g4551 409 Pfam UBA/TS-N domain 369 404 IPR015940 -
Mal3g4551 409 PANTHER RHOMBOID-LIKE PROTEIN 15 10 408 - -
Mal3g4551 409 SUPERFAMILY Rhomboid-like 26 220 IPR035952 -
Mal3g4551 409 Gene3D - 22 219 IPR035952 -
Mal3g4551 409 SUPERFAMILY UBA-like 362 408 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g4551 Mal-Chr3 125342289 125348385 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g4551 - - gmx:100798661 681.019